RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PLD1Q13393 1074 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 ACSBG2Q5FVE4 666 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 PERM1Q5SV97 790 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 CCDC185Q8N715 623 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 PIK3R5Q8WYR1 880 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 AHSPQ9NZD4 102 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 SLC27A5Q9Y2P5 690 aa13.79□□□□□ -0.2
VCP-201ENST00000358901 A0A0J9YYE9 177 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ZNF605Q86T29 641 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 CROCCP3Q8IVE0 287 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 SPATA22Q8NHS9 363 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 SLC35B2Q8TB61 432 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 AZIN2Q96A70 460 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 NACC2Q96BF6 587 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 PPP3R2Q96LZ3 170 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 MAP3K13O43283 966 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ADCY6O43306 1168 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 AP2A1O95782 977 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 CSH1P0DML2 217 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 CSH2P0DML3 217 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 TCF4P15884 667 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 SERPINA4P29622 427 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 DGKKQ5KSL6 1271 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 FSTL4Q6MZW2 842 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 SLC51AQ86UW1 340 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 KRT78Q8N1N4 520 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ZNF781Q8N8C0 355 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 GPR152Q8TDT2 470 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 PLEKHG4BQ96PX9 1271 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 KPNA3O00505 521 aaPredicted RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 IPO13O94829 963 aaKnown RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 VNN1O95497 513 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 CATP04040 527 aaKnown RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 CFHP08603 1231 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 IDO1P14902 403 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 LPOP22079 712 aaPredicted RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 PEX2P28328 305 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 AFTPHQ6ULP2 937 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 TMC5Q6UXY8 1006 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 LUZP2Q86TE4 346 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 LDB1Q86U70 411 aaPredicted RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 LPGAT1Q92604 370 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 DOLKQ9UPQ8 538 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 IPPQ9Y573 584 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 PCDHB9Q9Y5E1 797 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 KCNU1A8MYU2 1149 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 CST1P01037 141 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 DARSP14868 501 aaKnown RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 CD52P31358 61 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 PTPN9P43378 593 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ATXN1P54253 815 aaKnown RBP13.78□□□□□ -0.2
VCP-201ENST00000358901 ATP6V0D1P61421 351 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 USP46P62068 366 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 C19orf18Q8NEA5 215 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 RNFT2Q96EX2 444 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 NUAK2Q9H093 628 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 ATAD3AQ9NVI7 634 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 STMN3Q9NZ72 180 aa13.78□□□□□ -0.2
VCP-201ENST00000358901 H3BMM5 538 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 GCATO75600 419 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 POLD2P49005 469 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 MPP1Q00013 466 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 HECTD3Q5T447 861 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 DENND1CQ8IV53 801 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 TRIM48Q8IWZ4 208 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 C10orf53Q8N6V4 93 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 GLIS1Q8NBF1 620 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 C10orf82Q8WW14 230 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 LINGO1Q96FE5 620 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 EBF4Q9BQW3 602 aa13.77□□□□□ -0.2
VCP-201ENST00000358901 PNMA8CA0A1B0GUJ8 204 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 C9JVG2 144 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 IFRD1O00458 451 aaPredicted RBP13.77□□□□□ -0.21
VCP-201ENST00000358901 FGF1P05230 155 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.21
VCP-201ENST00000358901 GRIK3Q13003 919 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 BRMS1LQ5PSV4 323 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 PRRG3Q9BZD7 231 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 KLHL28Q9NXS3 571 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 FAM53CQ9NYF3 392 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 SATB2Q9UPW6 733 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 AP3M1Q9Y2T2 418 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 GMPPBQ9Y5P6 360 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms