RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 DNAJC14Q6Y2X3 702 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 TDRPQ86YL5 185 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 NELL1Q92832 810 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 HSD3B7Q9H2F3 369 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 TMEM39AQ9NV64 488 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 XPR1Q9UBH6 696 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 ARIH1Q9Y4X5 557 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 PARP4Q9UKK3 1724 aaKnown RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 CYP3A5P20815 502 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 ICAM3P32942 547 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 ADRA1BP35368 520 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 PTPN9P43378 593 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 SPIRE1Q08AE8 756 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 TCEA2Q15560 299 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 LACTB2Q53H82 288 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 ANXA8L1Q5VT79 327 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 KIAA0408Q6ZU52 694 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 SPATA19Q7Z5L4 167 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 C11orf74Q86VG3 221 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 TCAIMQ8N3R3 496 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 KCTD4Q8WVF5 259 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 P2RY11Q96G91 374 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 GLOD4Q9HC38 313 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 CAPN10Q9HC96 672 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 MAGEL2Q9UJ55 1249 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 C1QTNF3-AMACRE9PGA6 284 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 YBEYP58557 167 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 TUSC3Q13454 348 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 USP41Q3LFD5 358 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 EEF1DP3Q658K8 133 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 NEK5Q6P3R8 708 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 C11orf88Q6PI97 169 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 LEMD2Q8NC56 503 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 KBTBD8Q8NFY9 601 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 FETUBQ9UGM5 382 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 RSL24D1Q9UHA3 163 aaKnown RBP11.81□□□□□ -0.52
COL9A1-202ENST00000357250 LGALS13Q9UHV8 139 aa11.81□□□□□ -0.52
COL9A1-202ENST00000357250 NFKBIEO00221 500 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 CILPO75339 1184 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 HGFP14210 728 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 STX4Q12846 297 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 DPYSQ14117 519 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PDK3Q15120 406 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 TEX44Q53QW1 395 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 IKBIPQ70UQ0 350 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 SLC26A9Q7LBE3 791 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 GPR180Q86V85 440 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 OR4L1Q8NH43 312 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PLLPQ9Y342 182 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PCDHB1Q9Y5F3 818 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 AVILO75366 819 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 GNRH1P01148 92 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 COX10Q12887 443 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PARP15Q460N3 678 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 DUSP28Q4G0W2 176 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 MZT2AQ6P582 158 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 EIF3MQ7L2H7 374 aaKnown RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 ADCY4Q8NFM4 1077 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 ZSCAN18Q8TBC5 510 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 ELMO1Q92556 727 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 SLIT2O94813 1529 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 CAPN15O75808 1086 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 ARF4P18085 180 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 TNNI3P19429 210 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 CCR3P51677 355 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 WNT3AP56704 352 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 JAM2P57087 298 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 SPIDRQ14159 915 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PTPN20Q4JDL3 420 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 FNDC3BQ53EP0 1204 aaKnown RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 C9orf57Q5W0N0 161 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 TRAPPC5Q8IUR0 188 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 TBC1D21Q8IYX1 336 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 ENKURQ8TC29 256 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 LRRC4CQ9HCJ2 640 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 KCNE2Q9Y6J6 123 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 URADA6NGE7 173 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 CLDN11O75508 207 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 FGF19O95750 216 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PGK1P00558 417 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 C4BPAP04003 597 aaKnown RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 HDCP19113 662 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 STAT5AP42229 794 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 SULT2A1Q06520 285 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 NAIF1Q69YI7 327 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 MON1BQ7L1V2 547 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 TTC7BQ86TV6 843 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 PCDHB18PQ96TA0 734 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 C6orf62Q9GZU0 229 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-202ENST00000357250 NUAK2Q9H093 628 aa11.8□□□□□ -0.52
COL9A1-202ENST00000357250 MYH2Q9UKX2 1941 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 DHRS12A0PJE2 317 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 PTGES3LE9PB15 166 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms