RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CCDC162PA2VCL2 907 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 DCDC2CA8MYV0 355 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CXCR2P25025 360 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 OLR1P78380 273 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 METTL21CQ5VZV1 264 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 SCIMPQ6UWF3 145 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 C16orf62Q7Z3J2 963 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CMC1Q7Z7K0 106 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 AKAP14Q86UN6 197 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 COMMD2Q86X83 199 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 C12orf56Q8IXR9 622 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 OR52K2Q8NGK3 314 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ZFP28Q8NHY6 868 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 MCFD2Q8NI22 146 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 HSD17B14Q9BPX1 270 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 PRDM8Q9NQV8 689 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 TUBA8Q9NY65 449 aaPredicted RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 POLR1DQ9Y2S0 133 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 WBP11Q9Y2W2 641 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 LYNP07948 512 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CYP4F2P78329 520 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CYP4F3Q08477 520 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CCNIQ14094 377 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 SLC1A5Q15758 541 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 SETMARQ53H47 684 aaPredicted RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 SLCO6A1Q86UG4 719 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 SLC47A1Q96FL8 570 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 C2orf49Q9BVC5 232 aaPredicted RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 ZYG11BQ9C0D3 744 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 COMMD9Q9P000 198 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CDH22Q9UJ99 828 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 VWA7Q9Y334 891 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ERCC6L2Q5T890 1561 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ADAMTS13Q76LX8 1427 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 TIPRLO75663 272 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ECDO95905 644 aaPredicted RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 S100A9P06702 114 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 PRKAR1AP10644 381 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 UGT2B15P54855 530 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 HPS6Q86YV9 775 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 VPS4AQ9UN37 437 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 BAZ2BQ9UIF8 2168 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 SPATA31A6Q5VVP1 1343 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CAPGP40121 348 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 SGCGQ13326 291 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 LIN54Q6MZP7 749 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CUZD1Q86UP6 607 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ZBTB46Q86UZ6 589 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 MFSD14AQ96MC6 490 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 PANX1Q96RD7 426 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ACO2Q99798 780 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 RGL2O15211 777 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 TRMUO75648 421 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 PRG2P13727 222 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 MAPK8P45983 427 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 CXCL9Q07325 125 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 NOMO1Q15155 1222 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 OR5B17Q8NGF7 314 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 ADARB2Q9NS39 739 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 TRMT13Q9NUP7 481 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 DNAJC28Q9NX36 388 aa14.91□□□□□ -0.02
CHD4-201ENST00000357008 GNEQ9Y223 722 aaKnown RBP14.91□□□□□ -0.02
CHD4-201ENST00000357008 CXCL11O14625 94 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 LRIG2O94898 1065 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 UBA1P22314 1058 aaKnown RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 PPIBP23284 216 aaKnown RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 ATP5C1P36542 298 aaKnown RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 MATKP42679 507 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 RTP1P59025 263 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 FNBP1LQ5T0N5 605 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 HGSNATQ68CP4 663 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 C16orf59Q7L2K0 433 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SPATA6LQ8N4H0 392 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 RPRD1BQ9NQG5 326 aaKnown RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 ING3Q9NXR8 418 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SPG21Q9NZD8 308 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SPATA31C1P0DKV0 1188 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 ACLYP53396 1101 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 RAB25P57735 213 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 LYPLAL1Q5VWZ2 237 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 HLA-DQA1Q5Y7H0 255 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 BHLHB9Q6PI77 547 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SMYD1Q8NB12 490 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 LEMD2Q8NC56 503 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 ARRDC4Q8NCT1 418 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 ELMO1Q92556 727 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 OR52E6Q96RD3 313 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SEMA3CQ99985 751 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 ZNF222Q9UK12 451 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 A0A0J9YYE9 177 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 BTN3A3O00478 584 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 RFXANKO14593 260 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 COL6A2P12110 1019 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 EPORP19235 508 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 PSMD5Q16401 504 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 CDT1Q9H211 546 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 PNPLA8Q9NP80 782 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 DEPDC5O75140 1603 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms