RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ERVW-1Q9UQF0 538 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 MTCH2Q9Y6C9 303 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 TNRC18O15417 2968 aaPredicted RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 HMX2A2RU54 273 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 FAM47DPA6NHR8 397 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 ANKRD66B4E2M5 251 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 TULP3O75386 442 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 PYGBP11216 843 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 SLC8A1P32418 973 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 TMPRSS15P98073 1019 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 GRM2Q14416 872 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 DLG2Q15700 870 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 QPCTQ16769 361 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 ARMC12Q5T9G4 340 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 MICALCLQ6ZW33 695 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 GLT6D1Q7Z4J2 308 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 OR13J1Q8NGT2 312 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 SORCS1Q8WY21 1168 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 E2F7Q96AV8 911 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 ATXN7L3BQ96GX2 97 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 KXD1Q9BQD3 176 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 CEP44Q9C0F1 390 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 TTYH1Q9H313 450 aaPredicted RBP20.65■□□□□ 0.9
TRIM4-202ENST00000354241 ATP13A3Q9H7F0 1226 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 ECT2Q9H8V3 914 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 NSMCE4AQ9NXX6 385 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 DENND4AQ7Z401 1863 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 OTOL1A6NHN0 477 aaPredicted RBP20.65■□□□□ 0.9
TRIM4-202ENST00000354241 CCL22O00626 93 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 PRPF4O43172 522 aaKnown RBP eCLIP20.65■□□□□ 0.9
TRIM4-202ENST00000354241 CRTAMO95727 393 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 ITGA2BP08514 1039 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 GRIN2CQ14957 1233 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 LRRC14Q15048 493 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 CTC1Q2NKJ3 1217 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 MFSD6LQ8IWD5 586 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 PCDH20Q8N6Y1 951 aaKnown RBP20.65■□□□□ 0.9
TRIM4-202ENST00000354241 PTPRN2Q92932 1015 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 RBBP8Q99708 897 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 PLA2G2FQ9BZM2 168 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 SSU72Q9NP77 194 aaKnown RBP20.65■□□□□ 0.9
TRIM4-202ENST00000354241 HPS4Q9NQG7 708 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 GGT7Q9UJ14 662 aa20.65■□□□□ 0.9
TRIM4-202ENST00000354241 FZD6O60353 706 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 PGLSO95336 258 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 GSRP00390 522 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 SLC4A1P02730 911 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 SP100P23497 879 aaPredicted RBP20.64■□□□□ 0.89
TRIM4-202ENST00000354241 SPRP35270 261 aaPredicted RBP20.64■□□□□ 0.89
TRIM4-202ENST00000354241 ABCG1P45844 678 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 SLC6A11P48066 632 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 PRAMEP78395 509 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 PTPRCAPQ14761 206 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 MICALL1Q8N3F8 863 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 WFIKKN2Q8TEU8 576 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 HDAC10Q969S8 669 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 ALKBH8Q96BT7 664 aaKnown RBP20.64■□□□□ 0.89
TRIM4-202ENST00000354241 DNAJC1Q96KC8 554 aaKnown RBP20.64■□□□□ 0.89
TRIM4-202ENST00000354241 FAM167BQ9BTA0 163 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 POMKQ9H5K3 350 aa20.64■□□□□ 0.89
TRIM4-202ENST00000354241 REV3LO60673 3130 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 AURKAO14965 403 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 TYROBPO43914 113 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 RFPL1O75677 317 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 LAMP2P13473 410 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 IGFBP4P22692 258 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 LSP1P33241 339 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 RPA3P35244 121 aaPredicted RBP20.63■□□□□ 0.89
TRIM4-202ENST00000354241 ABL2P42684 1182 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 MTHFRP42898 656 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 ARSDP51689 593 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 CSE1LP55060 971 aaKnown RBP20.63■□□□□ 0.89
TRIM4-202ENST00000354241 FCHO2Q0JRZ9 810 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 TAF1AQ15573 450 aaPredicted RBP20.63■□□□□ 0.89
TRIM4-202ENST00000354241 MYLK3Q32MK0 819 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 CARD16Q5EG05 197 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 Q6ZVU0 165 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 TAX1BP1Q86VP1 789 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 DENND6AQ8IWF6 608 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 CNTN4Q8IWV2 1026 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 ETFBKMTQ8IXQ9 262 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 OTUD6BQ8N6M0 293 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 BANPQ8N9N5 519 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 MDGA1Q8NFP4 955 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 OR13C4Q8NGS5 318 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 OR6P1Q8NGX9 317 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 TTC8Q8TAM2 541 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 STYXQ8WUJ0 223 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 DYDC1Q8WWB3 177 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 ATXN2LQ8WWM7 1075 aaKnown RBP20.63■□□□□ 0.89
TRIM4-202ENST00000354241 TRAFD1O14545 582 aaPredicted RBP20.63■□□□□ 0.89
TRIM4-202ENST00000354241 SOCS5O75159 536 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 SERPINA4P29622 427 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 LTBRP36941 435 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 NNMTP40261 264 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 CCNHP51946 323 aaPredicted RBP20.63■□□□□ 0.89
TRIM4-202ENST00000354241 LIMK2P53671 638 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 PDE1BQ01064 536 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 CTBP1Q13363 440 aa20.63■□□□□ 0.89
TRIM4-202ENST00000354241 PTPRRQ15256 657 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms