RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HDAC11Q96DB2 347 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 P2RY11Q96G91 374 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 LRCH3Q96II8 777 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF670Q9BS34 389 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 FUNDC2Q9BWH2 189 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TDRD1Q9BXT4 1180 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 B3GNT5Q9BYG0 378 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ELOVL4Q9GZR5 314 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 WDR70Q9NW82 654 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 DTLQ9NZJ0 730 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ANKMY1Q9P2S6 941 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TSPAN16Q9UKR8 245 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MTF2Q9Y483 593 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SPO11Q9Y5K1 396 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TNPO2O14787 897 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 IDH3BO43837 385 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 GABBR2O75899 941 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ENDOD1O94919 500 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ITGB3P05106 788 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 EDN1P05305 212 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 NAT1P18440 290 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 NAMPTP43490 491 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SERPINB10P48595 397 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 IL1RL1Q01638 556 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 BAATQ14032 418 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 DGCR6Q14129 220 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 XKR3Q5GH77 459 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 INTS11Q5TA45 600 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TMEM236Q5W0B7 351 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CLEC6AQ6EIG7 209 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 R3HCC1LQ7Z5L2 792 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 FAM131BQ86XD5 332 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 NT5DC4Q86YG4 428 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SPNS2Q8IVW8 549 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ADAMTS16Q8TE57 1224 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SDCCAG3Q96C92 435 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MAGED4Q96JG8 741 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ELMO2Q96JJ3 720 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 IL12RB2Q99665 862 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SEZ6LQ9BYH1 1024 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 PNMA8BQ9ULN7 279 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 INO80B-WBP1J3KQ70 363 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 DLGAP1O14490 977 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 SEC24AO95486 1093 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 NR3C2P08235 984 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ECT2LQ008S8 904 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 FPGSQ05932 587 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ENPEPQ07075 957 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 GALNT2Q10471 571 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 SLC12A1Q13621 1099 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CSHL1Q14406 222 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 GOLGA7BQ2TAP0 167 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 AGAP7PQ5VUJ5 663 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CNSTQ6PJW8 725 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CYS1Q717R9 158 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CYP2U1Q7Z449 544 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 LSMEM2Q8N112 164 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 KDM1BQ8NB78 822 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 S100ZQ8WXG8 99 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 FAM149B1Q96BN6 582 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 FAR2Q96K12 515 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 QKIQ96PU8 341 aaKnown RBP eCLIP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CSF3RQ99062 836 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 TUBA1CQ9BQE3 449 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF341Q9BYN7 854 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 IL22Q9GZX6 179 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 TBC1D14Q9P2M4 693 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CARD8Q9Y2G2 431 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 IFT52Q9Y366 437 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 LOXHD1Q8IVV2 1947 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF646O15015 1829 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 MSI1O43347 362 aaKnown RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 RASAL1O95294 804 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ATG7O95352 703 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CHRM3P20309 590 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 GPD2P43304 727 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 TUFMP49411 452 aaKnown RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 HK2P52789 917 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CTBP1Q13363 440 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 HABP4Q5JVS0 413 aaKnown RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 UBE2UQ5VVX9 321 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 UGT3A1Q6NUS8 523 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 TAF2Q6P1X5 1199 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 PLEKHG7Q6ZR37 379 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CYP4V2Q6ZWL3 525 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 PAGE2Q7Z2X7 111 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 MMAAQ8IVH4 418 aaKnown RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 SPPL2BQ8TCT7 592 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 PRMT6Q96LA8 375 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 CSPG4P5Q96PW8 444 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 IDI2Q9BXS1 227 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 PTPRHQ9HD43 1115 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ITM2CQ9NQX7 267 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ARMC1Q9NVT9 282 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 ANAPC2Q9UJX6 822 aa7.67□□□□□ -1.18
BRCA1-201ENST00000352993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.67□□□□□ -1.18
BRCA1-201ENST00000352993 H0Y858 1186 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms