RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 HP1BP3Q5SSJ5 553 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-202ENST00000348495 BEND6Q5SZJ8 279 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-202ENST00000348495 KIAA1211LQ6NV74 962 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 RMDN1Q96DB5 314 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 NELL2Q99435 816 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 RSPH9Q9H1X1 276 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-202ENST00000348495 HOXB2P14652 356 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 SLC8A1P32418 973 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 CCDC38Q502W7 563 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 BRAT1Q6PJG6 821 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 DSG4Q86SJ6 1040 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 PIP4K2CQ8TBX8 421 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 ANKRD7Q92527 254 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 ARGLU1Q9NWB6 273 aaPredicted RBP27.23■■□□□ 1.95
SSBP4-202ENST00000348495 PPIL1Q9Y3C6 166 aa27.23■■□□□ 1.95
SSBP4-202ENST00000348495 CPP00450 1065 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 LRRC32Q14392 662 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 ARMC3Q5W041 872 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 FBXO36Q8NEA4 188 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 SMIM14Q96QK8 99 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 EBNA1BP2Q99848 306 aaKnown RBP27.22■■□□□ 1.95
SSBP4-202ENST00000348495 FOXQ1Q9C009 403 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 PHTF1Q9UMS5 762 aa27.22■■□□□ 1.95
SSBP4-202ENST00000348495 C7P10643 843 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 COL9A1P20849 921 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 ZXDAP98168 799 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 STARD3Q14849 445 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 TJAP1Q5JTD0 557 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 EOGTQ5NDL2 527 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 PKN3Q6P5Z2 889 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 Q6ZS52 159 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 ANKMY2Q8IV38 441 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 MMAAQ8IVH4 418 aaKnown RBP27.21■■□□□ 1.95
SSBP4-202ENST00000348495 MREGQ8N565 214 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 OR2T3Q8NH03 318 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 C9orf72Q96LT7 481 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 CDC42EP4Q9H3Q1 356 aaKnown RBP27.21■■□□□ 1.95
SSBP4-202ENST00000348495 SEMA4AQ9H3S1 761 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 FBRSQ9HAH7 460 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 LMAN1LQ9HAT1 526 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 MMP17Q9ULZ9 603 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 CHMP2BQ9UQN3 213 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 MYLKQ15746 1914 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 A0A0J9YYE9 177 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 TRBC1P01850 177 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 COPAP53621 1224 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 PMS2P54278 862 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 EPHB1P54762 984 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 POU6F1Q14863 301 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 UBXN2BQ14CS0 331 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 DENND2CQ68D51 928 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 ERLEC1Q96DZ1 483 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 STAMBPL1Q96FJ0 436 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 RANBP9Q96S59 729 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 TBC1D17Q9HA65 648 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 SPO11Q9Y5K1 396 aa27.21■■□□□ 1.95
SSBP4-202ENST00000348495 FAM170BA6NMN3 283 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 CHURC1-FNTBB4DL54 471 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 IL1BP01584 269 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 PRKCGP05129 697 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 ITGB7P26010 798 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 METAP1P53582 386 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 PCID2Q5JVF3 399 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 CFAP58Q5T655 872 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 PYROXD1Q8WU10 500 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 MCCC1Q96RQ3 725 aaPredicted RBP27.2■■□□□ 1.94
SSBP4-202ENST00000348495 KIFC1Q9BW19 673 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 PLAC1Q9HBJ0 212 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 NINJ2Q9NZG7 142 aa27.2■■□□□ 1.94
SSBP4-202ENST00000348495 C16orf96A6NNT2 1141 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 KPNA3O00505 521 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 DYNC1I1O14576 645 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 PIRTP0C851 137 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 TIMP2P16035 220 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 POLR2LP62875 67 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 SATB1Q01826 763 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 PTPRRQ15256 657 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 UGP2Q16851 508 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 TRMT10CQ7L0Y3 403 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 PTCD2Q8WV60 388 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 ARRDC3Q96B67 414 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 LYSMD1Q96S90 227 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 NAT9Q9BTE0 207 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 EPB41L4BQ9H329 900 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 MAGEE1Q9HCI5 957 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 SOX13Q9UN79 622 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 TCAF1Q9Y4C2 921 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 MAD1L1Q9Y6D9 718 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 MAGEB16A2A368 324 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 C1QTNF3-AMACRE9PGA6 284 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 CTPS1P17812 591 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 ADRA1DP25100 572 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 KYNUQ16719 465 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 POM121L1PQ3SYA9 428 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 UBAP2Q5T6F2 1119 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 TMEM92Q6UXU6 159 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 PARS2Q7L3T8 475 aaKnown RBP27.19■■□□□ 1.94
SSBP4-202ENST00000348495 CCNJLQ8IV13 435 aa27.19■■□□□ 1.94
SSBP4-202ENST00000348495 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.19■■□□□ 1.942e-6■■■■□ 19.6
SSBP4-202ENST00000348495 BRSK1Q8TDC3 778 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms