RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 CBR4Q8N4T8 237 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 TRIM8Q9BZR9 551 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 POLR1EQ9GZS1 481 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 PDZD7Q9H5P4 517 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 COQ10BQ9H8M1 238 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 ATP6V1HQ9UI12 483 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 TMEM114B3SHH9 223 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 PRR23D1E9PI22 279 aaPredicted RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 RAD51BO15315 384 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 PLIN3O60664 434 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 PRR23D2P0DMB1 279 aaPredicted RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 MTHFD1P11586 935 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 CD52P31358 61 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 GRK3P35626 688 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 OAZ1P54368 228 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 DLG1Q12959 904 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 SYT12Q8IV01 421 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 NAT8LQ8N9F0 302 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 TMEM109Q9BVC6 243 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 OPTCQ9UBM4 332 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 PSMD13Q9UNM6 376 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 H3BMM5 538 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 WBP4O75554 376 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 FADS2O95864 444 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 CNPP09543 421 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 DSC2Q02487 901 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 SIM2Q14190 667 aaPredicted RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 SLC25A52Q3SY17 297 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 ABRAXAS1Q6UWZ7 409 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 ARL10Q8N8L6 244 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 REXO5Q96IC2 774 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 GLT1D1Q96MS3 346 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 SERPINB11Q96P15 392 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 SELENONQ9NZV5 590 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 C6orf203Q9P0P8 240 aaPredicted RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 UBA2Q9UBT2 640 aaPredicted RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
SMG7-201ENST00000347615 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
SMG7-201ENST00000347615 IQCA1LA6NCM1 817 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 SLC15A5A6NIM6 579 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 PDZK1P1A8MUH7 402 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 STK25O00506 426 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 COX7A2P14406 83 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 S100A3P33764 101 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 ARL2P36404 184 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 SEPHS1P49903 392 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 PSMD7P51665 324 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 CRY1Q16526 586 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 ALFQ53S48 1182 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 LINGO4Q6UY18 593 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 UXS1Q8NBZ7 420 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 SELENOMQ8WWX9 145 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 LINGO1Q96FE5 620 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 DUSP16Q9BY84 665 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 MIEF1Q9NQG6 463 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 TRPM5Q9NZQ8 1165 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 GTF2A1LQ9UNN4 478 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 IPPQ9Y573 584 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 A0A1W2PQH9 124 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 AZIN1O14977 448 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 NOBOXO60393 691 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 EGFRP00533 1210 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 CKMT2P17540 419 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 POLD2P49005 469 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 TRAF3Q13114 568 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.72
SMG7-201ENST00000347615 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.72
SMG7-201ENST00000347615 GSTA3Q16772 222 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 PLEKHM3Q6ZWE6 761 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 FAM35AQ86V20 835 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 MAGEC3Q8TD91 643 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 DLG3Q92796 817 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 C7orf26Q96N11 449 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 LHX5Q9H2C1 402 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 ZDHHC6Q9H6R6 413 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 ASB8Q9H765 288 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 CLK4Q9HAZ1 481 aaKnown RBP10.52□□□□□ -0.72
SMG7-201ENST00000347615 TRNAU1APQ9NX07 287 aaKnown RBP10.52□□□□□ -0.72
SMG7-201ENST00000347615 DTLQ9NZJ0 730 aa10.52□□□□□ -0.72
SMG7-201ENST00000347615 C2CD4BA6NLJ0 364 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 FAM25AB3EWG3 89 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 FAM25CB3EWG5 89 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 FAM25GB3EWG6 89 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 CNOT3O75175 753 aaKnown RBP10.52□□□□□ -0.73
SMG7-201ENST00000347615 CYP7B1O75881 506 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 TYMPP19971 482 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 PRKAG1P54619 331 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 COL9A2Q14055 689 aaPredicted RBP10.52□□□□□ -0.73
SMG7-201ENST00000347615 SOWAHAQ2M3V2 549 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 STXBP5Q5T5C0 1151 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 NT5DC4Q86YG4 428 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 HIPK1Q86Z02 1210 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 SIAH1Q8IUQ4 282 aa10.52□□□□□ -0.73
SMG7-201ENST00000347615 FSTL5Q8N475 847 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms