RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 AGBL4Q5VU57 503 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 LYSMD4Q5XG99 296 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 KIAA0895LQ68EN5 471 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 DRICH1Q6PGQ1 229 aaPredicted RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 C4orf22Q6V702 233 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 ARHGEF18Q6ZSZ5 1173 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 B4GALNT4Q76KP1 1039 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 PARS2Q7L3T8 475 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 GSTA5Q7RTV2 222 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 PRPF39Q86UA1 669 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 RGL4Q8IZJ4 473 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 ZNF567Q8N184 647 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 CNTD1Q8N815 330 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FRMD1Q8N878 549 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 CCDC89Q8N998 374 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FAM71DQ8N9W8 422 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FAM131CQ96AQ9 280 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 ECHDC3Q96DC8 303 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 IFT43Q96FT9 208 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 IMP4Q96G21 291 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 HSPA12BQ96MM6 686 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FAM118BQ9BPY3 351 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 CEP41Q9BYV8 373 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FAM86C1Q9NVL1 165 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 SERGEFQ9UGK8 458 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 SUSD2Q9UGT4 822 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 FAM153AQ9UHL3 310 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 DNPEPQ9ULA0 475 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 PHTF1Q9UMS5 762 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 SMG5Q9UPR3 1016 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 DRG1Q9Y295 367 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 R3HDM2Q9Y2K5 976 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 AAR2Q9Y312 384 aaKnown RBP11.93□□□□□ -0.5
SNCA-202ENST00000345009 PCDHB9Q9Y5E1 797 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 PCDHGA5Q9Y5G8 931 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 GPR179Q6PRD1 2367 aa11.93□□□□□ -0.5
SNCA-202ENST00000345009 NUMA1Q14980 2115 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 TSPAN11A1L157 253 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 TTC24A2A3L6 582 aaPredicted RBP11.92□□□□□ -0.5
SNCA-202ENST00000345009 PRR23AA6NEV1 266 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 PROB1E7EW31 1015 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 PLK4O00444 970 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 TRAFD1O14545 582 aaPredicted RBP11.92□□□□□ -0.5
SNCA-202ENST00000345009 GCATO75600 419 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 PGLSO95336 258 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 CPP00450 1065 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 RETP07949 1114 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 CYP2A6P11509 494 aaPredicted RBP11.92□□□□□ -0.5
SNCA-202ENST00000345009 HOXD12P35452 270 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 METAP1P53582 386 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 FAM193AP78312 1265 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 SNX1Q13596 522 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 P3H1Q32P28 736 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 SETMARQ53H47 684 aaPredicted RBP11.92□□□□□ -0.5
SNCA-202ENST00000345009 ANKRD20A2Q5SQ80 823 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 ANKRD20A1Q5TYW2 823 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 ANKRD20A3Q5VUR7 823 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 KIAA1161Q6NSJ0 714 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 USP45Q70EL2 814 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 CYP2U1Q7Z449 544 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 CEP76Q8TAP6 659 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 ARRDC2Q8TBH0 407 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 CXorf40AQ8TE69 158 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 COG1Q8WTW3 980 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 C1orf54Q8WWF1 131 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 ATG4AQ8WYN0 398 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 SNX19Q92543 992 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 MAGOHBQ96A72 148 aaKnown RBP11.92□□□□□ -0.5
SNCA-202ENST00000345009 SKA1Q96BD8 255 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 SPATA13Q96N96 652 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 FCRL5Q96RD9 977 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 SRPK1Q96SB4 655 aaKnown RBP11.92□□□□□ -0.5
SNCA-202ENST00000345009 TMEM121Q9BTD3 319 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 C1QTNF7Q9BXJ2 289 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 USP29Q9HBJ7 922 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 PCDH9Q9HC56 1237 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 NCDNQ9UBB6 729 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 DMTF1Q9Y222 760 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 FADS3Q9Y5Q0 445 aa11.92□□□□□ -0.5
SNCA-202ENST00000345009 PIEZO1Q92508 2521 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 PRR5-ARHGAP8B1AHC4 643 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 AREL1O15033 823 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 PSMD3O43242 534 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 FOXD2O60548 495 aaPredicted RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 RNGTTO60942 597 aaKnown RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 IFNB1P01574 187 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 EPOP01588 193 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 CD27P26842 260 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 GEMP55040 296 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 CREB5Q02930 508 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 NIPAL4Q0D2K0 466 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 TRAF2Q12933 501 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 MPP3Q13368 585 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 OASLQ15646 514 aaKnown RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 LPAL2Q16609 132 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 PARP6Q2NL67 630 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 TRIM69Q86WT6 500 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 HORMAD1Q86X24 394 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 SYT12Q8IV01 421 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms