RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TCF12Q99081 682 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 GLOD4Q9HC38 313 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 VPS45Q9NRW7 570 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 MRGBPQ9NV56 204 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ATP11BQ9Y2G3 1177 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 DLX3O60479 287 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 PAGE1O75459 146 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 AKT1P31749 480 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 LPIN1Q14693 890 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 PTPRNQ16849 979 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC44A2Q8IWA5 706 aaPredicted RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SHKBP1Q8TBC3 707 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC35F5Q8WV83 523 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SYTL2Q9HCH5 934 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SCHIP1Q9P0W5 487 aaPredicted RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 FZD10Q9ULW2 581 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM72CH0Y354 149 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 TREHO43280 583 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 C22orf31O95567 290 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 DLGAP3O95886 979 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 MTHFD1P11586 935 aaKnown RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 EPHX2P34913 555 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 INPP1P49441 399 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 MRPS15P82914 257 aaKnown RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 PWP1Q13610 501 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 MFSD10Q14728 455 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 TLR1Q15399 786 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM72AQ5TYM5 149 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 CDCA2Q69YH5 1023 aaPredicted RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM72DQ6L9T8 149 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 ZYG11AQ6WRX3 759 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 TMEM110Q86TL2 294 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM72BQ86X60 149 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 CFAP52Q8N1V2 620 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 ATG16L2Q8NAA4 619 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 TNIP2Q8NFZ5 429 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SCAMP5Q8TAC9 235 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 CYP2S1Q96SQ9 504 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 BCO2Q9BYV7 579 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 RGS5O15539 181 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC5A3P53794 718 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 PRKAA2P54646 552 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 TMEM214Q6NUQ4 689 aaKnown RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 HORMAD1Q86X24 394 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 BTBD9Q96Q07 612 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
SNRNP48-201ENST00000342415 AZIN1O14977 448 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 DAB1O75553 588 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ESRRBO95718 433 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ZCCHC7Q8N3Z6 543 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ATP6V0D2Q8N8Y2 350 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 RIBC2Q9H4K1 309 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 IPPQ9Y573 584 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 NRP1O14786 923 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 POU1F1P28069 291 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 GGT5P36269 586 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC1A2P43004 574 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 PPP1R3AQ16821 1122 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 REP15Q6BDI9 236 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 CLHC1Q8NHS4 586 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM120BQ96EK7 910 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ZMAT2Q96NC0 199 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 GMLQ99445 158 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 OXSMQ9NWU1 459 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SCN3BQ9NY72 215 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 CRLS1Q9UJA2 301 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 A0A087X1B8 175 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SEC22BO75396 215 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 HIST1H2AGP0C0S8 130 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 IQCF3P0C7M6 154 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 HIST1H2ADP20671 130 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SERPINB10P48595 397 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 XIAPP98170 497 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 DSC2Q02487 901 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 MSLNQ13421 630 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 TRIM60Q495X7 471 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 GCNT7Q6ZNI0 430 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 GLT6D1Q7Z4J2 308 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 PLEKHH3Q7Z736 793 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 CIR1Q86X95 450 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 CLYBLQ8N0X4 340 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms