RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NETO2Q8NC67 525 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLC35G2Q8TBE7 412 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 BTN2A2Q8WVV5 523 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 RFFLQ8WZ73 363 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 GATA6Q92908 595 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 FAF2Q96CS3 445 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 TBATAQ96M53 351 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 NUDCD1Q96RS6 583 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 CHP1Q99653 195 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 PCDH12Q9NPG4 1184 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 EVA1BQ9NVM1 165 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 AMACRQ9UHK6 382 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 KLK13Q9UKR3 277 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 EPG5Q9HCE0 2579 aa13.44□□□□□ -0.26
SIRPB3P-201ENST00000340424 TMEM110-MUSTN1A8MSY1 372 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 TRAFD1O14545 582 aaPredicted RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 RFPL3O75679 317 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 PIAS2O75928 621 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 TOP3BO95985 862 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 CSF2P04141 144 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 NME1P15531 152 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 CKMT2P17540 419 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 CR2P20023 1033 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 SPINK2P20155 84 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 MX2P20592 715 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 CES1P23141 567 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 DGKAP23743 735 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 GARSP41250 739 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLC1A1P43005 524 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 MMP13P45452 471 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 PEX5P50542 639 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 THOP1P52888 689 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 GALNT2Q10471 571 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 PDE1CQ14123 709 aaPredicted RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 FZD2Q14332 565 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 LRRC14Q15048 493 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 SMAD1Q15797 465 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 IFI16Q16666 785 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 ST3GAL2Q16842 350 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 ANKRD20A8PQ5CZ79 823 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 LRRC73Q5JTD7 316 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 LRRC38Q5VT99 294 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 TMPRSS7Q7RTY8 843 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 CCDC170Q8IYT3 715 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 PNPLA1Q8N8W4 532 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 KDF1Q8NAX2 398 aaPredicted RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 OR4C6Q8NH72 309 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 WRAP53Q9BUR4 548 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 USP29Q9HBJ7 922 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 LUC7LQ9NQ29 371 aaKnown RBP13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 KCTD5Q9NXV2 234 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 NLGN3Q9NZ94 848 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 NCKIPSDQ9NZQ3 722 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 CSNK1G3Q9Y6M4 447 aa13.43□□□□□ -0.26
SIRPB3P-201ENST00000340424 ESPNB1AK53 854 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 MUSKO15146 869 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 HTRA2O43464 458 aaPredicted RBP13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 CD48P09326 243 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 C6P13671 934 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 IGFALSP35858 605 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 GJC1P36383 396 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 TAS2R40P59535 323 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 MESDQ14696 234 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZFYVE27Q5T4F4 411 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 NCBP2-AS2Q69YL0 99 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 CCNI2Q6ZMN8 369 aaPredicted RBP13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 MACC1Q6ZN28 852 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 DPPA4Q7L190 304 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 TMPRSS12Q86WS5 348 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 TP53INP2Q8IXH6 220 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLC25A45Q8N413 288 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 TEX26Q8N6G2 289 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 ATL2Q8NHH9 583 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 PCDH19Q8TAB3 1148 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 TSGA13Q96PP4 275 aa13.42□□□□□ -0.26
SIRPB3P-201ENST00000340424 FREM2Q5SZK8 3169 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 GOLGA8CPA6NN73 597 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 SCAMP1O15126 338 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 MATN3O15232 486 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 MFSD11O43934 449 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 LZTS3O60299 673 aaPredicted RBP13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 SDC3O75056 442 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 NUDT7P0C024 238 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ELFN1P0C7U0 828 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 KRT10P13645 584 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 HOXB1P14653 301 aaPredicted RBP13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 KDELR1P24390 212 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ACP1P24666 158 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 CCNCP24863 283 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 HTR1BP28222 390 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 HNF1BP35680 557 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ACADVLP49748 655 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms