RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 H0YAE9 185 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 HAX1O00165 279 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 SOCS7O14512 581 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 DPYSL4O14531 572 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 TIMM44O43615 452 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 PSMA4P25789 261 aaKnown RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 SHMT2P34897 504 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 ARL2P36404 184 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 CSE1LP55060 971 aaKnown RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 GJA9P57773 515 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 YBX1P67809 324 aaKnown RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 TFAMQ00059 246 aaKnown RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 PRKCEQ02156 737 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 FRG1Q14331 258 aaKnown RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 GRM3Q14832 879 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 LRIT3Q3SXY7 679 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 PPP2R2DQ66LE6 453 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 LCN8Q6JVE9 175 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 FUNDC1Q8IVP5 155 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 CLIP4Q8N3C7 705 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 CCNYL1Q8N7R7 359 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 OR9I1Q8NGQ6 314 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 KCTD4Q8WVF5 259 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 ZNF669Q96BR6 464 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 TXNDC15Q96J42 360 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 VPS39Q96JC1 886 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 FAR2Q96K12 515 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 SCYL1Q96KG9 808 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 PDCD2LQ9BRP1 358 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 PORCNQ9H237 461 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 TNFRSF12AQ9NP84 129 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 POLE4Q9NR33 117 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 MAP10Q9P2G4 905 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 ZNF639Q9UID6 485 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 ANKRD6Q9Y2G4 727 aa9.46□□□□□ -0.9
NECAP1-201ENST00000339754 MTF2Q9Y483 593 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-201ENST00000339754 CLRN2A0PK11 232 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 AURKAO14965 403 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 NPHS1O60500 1241 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 FARP2O94887 1054 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 KRT75O95678 551 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 S100BP04271 92 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 HOXC6P09630 235 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 BMP4P12644 408 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CYP3A5P20815 502 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CRHBPP24387 322 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 PSMB4P28070 264 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 RFC2P35250 354 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 C1QTNF8P60827 252 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CDC20Q12834 499 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 DPYSL2Q16555 572 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 NCBP2-AS2Q69YL0 99 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CENPLQ8N0S6 344 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 OR52K1Q8NGK4 314 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CALML6Q8TD86 181 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 HDAC11Q96DB2 347 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 GPR78Q96P69 363 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 OMDQ99983 421 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 OSBPL10Q9BXB5 764 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 OSBPL2Q9H1P3 480 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 LRRC40Q9H9A6 602 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 MEAF6Q9HAF1 191 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 LRRC4Q9HBW1 653 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 MOV10Q9HCE1 1003 aaKnown RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 GBA2Q9HCG7 927 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 GMIPQ9P107 970 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ACTR3BQ9P1U1 418 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ABCD2Q9UBJ2 740 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 DKK3Q9UBP4 350 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ENPP5Q9UJA9 477 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 TLK1Q9UKI8 766 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ILVBLA1L0T0 632 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 TCP10L2B9ZVM9 353 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 XYLBO75191 536 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 HTR1AP08908 422 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 SLC35E2BP0CK96 405 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 HSD17B1P14061 328 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 HNRNPLP14866 589 aaKnown RBP eCLIP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CCND2P30279 289 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CAP2P40123 477 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 DPY19L1Q2PZI1 675 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ANO4Q32M45 955 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 PMF1Q6P1K2 205 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 R3HCC1LQ7Z5L2 792 aaKnown RBP9.45□□□□□ -0.9
NECAP1-201ENST00000339754 SLCO6A1Q86UG4 719 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ARMC8Q8IUR7 673 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 SCML4Q8N228 414 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 TMEM130Q8N3G9 435 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 OR7G1Q8NGA0 311 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 SLC22A17Q8WUG5 538 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 TP53INP1Q96A56 240 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 ROPN1LQ96C74 230 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 TMEM176AQ96HP8 235 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 MAGED4Q96JG8 741 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 CSPG4P5Q96PW8 444 aa9.45□□□□□ -0.9
NECAP1-201ENST00000339754 GPR22Q99680 433 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms