RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ESRRGP62508 458 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 OGDHQ02218 1023 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 KCNA10Q16322 511 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 DUSP7Q16829 419 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CYBRD1Q53TN4 286 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CATSPEREQ5SY80 951 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 KIAA0408Q6ZU52 694 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PCGF5Q86SE9 256 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SLC22A16Q86VW1 577 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 LACC1Q8IV20 430 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 UNC45BQ8IWX7 931 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SIX6OS1Q8N1H7 587 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SGCDQ92629 289 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 USP13Q92995 863 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 FBXL20Q96IG2 436 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MAGED4Q96JG8 741 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CXCL16Q9H2A7 254 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 RNPEPQ9H4A4 650 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SP140LQ9H930 580 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CCDC177Q9NQR7 707 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SEL1LQ9UBV2 794 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CNOT6Q9ULM6 557 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 UGT2A1Q9Y4X1 527 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 RAD54BQ9Y620 910 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SMG1Q96Q15 3661 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 OR5K3A6NET4 321 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ARVCFO00192 962 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SHOXO15266 292 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 IDH3BO43837 385 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MYCP01106 439 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SNRPAP09012 282 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CDH1P12830 882 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 POLR2CP19387 275 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MX2P20592 715 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ME2P23368 584 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ETFBP38117 255 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 GCLMP48507 274 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CYP2J2P51589 502 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 IST1P53990 364 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ATXN3P54252 364 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MERTKQ12866 999 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 POU6F1Q14863 301 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 GEN1Q17RS7 908 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 UNC5AQ6ZN44 842 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 NEK10Q6ZWH5 1172 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CAND1Q86VP6 1230 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SNX32Q86XE0 403 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 TNS4Q8IZW8 715 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PPM1NQ8N819 430 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 KYQ8NBH2 561 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ZSCAN18Q8TBC5 510 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CPA5Q8WXQ8 436 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 APBB2Q92870 758 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CALN1Q9BXU9 219 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PCDHAC1Q9H158 963 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 C2orf40Q9H1Z8 148 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 AASDHPPTQ9NRN7 309 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 GMIPQ9P107 970 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 FBXO40Q9UH90 709 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 XPO7Q9UIA9 1087 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 RGSL1A5PLK6 1076 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 FAM159BA6NKW6 160 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 B4GAT1O43505 415 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PLIN3O60664 434 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SLC7A1P30825 629 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 HOXA11P31270 313 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 IFNA8P32881 189 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 KRT6CP48668 564 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MAPK10P53779 464 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PLA2G16P53816 162 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PRKAA2P54646 552 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 YWHAZP63104 245 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 CDK10Q15131 360 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 LY6KQ17RY6 165 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 FAM171BQ6P995 826 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF534Q76KX8 674 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 VN1R5Q7Z5H4 357 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SPRED2Q7Z698 418 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SPRED1Q7Z699 444 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 AKAP14Q86UN6 197 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PIGZQ86VD9 579 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 C10orf107Q8IVU9 208 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 HACE1Q8IYU2 909 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 RCOR2Q8IZ40 523 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ARFGAP1Q8N6T3 406 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF781Q8N8C0 355 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 TNIP2Q8NFZ5 429 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 GABPB2Q8TAK5 448 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 RAB2BQ8WUD1 216 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 POMGNT1Q8WZA1 660 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 RCN3Q96D15 328 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF668Q96K58 619 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ASB2Q96Q27 587 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 ADI1Q9BV57 179 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 OR2B2Q9GZK3 357 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 SEPT3Q9UH03 358 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms