RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 C8AP07357 584 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 GABRB3P28472 473 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 CD151P48509 253 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 AQP5P55064 265 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 IRX1P78414 480 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 ITGA9Q13797 1035 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 SIRPB2Q5JXA9 342 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 KIAA0408Q6ZU52 694 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 LCA5Q86VQ0 697 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 PIWIL2Q8TC59 973 aaKnown RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 CALML6Q8TD86 181 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 TMEM237Q96Q45 408 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 SIKE1Q9BRV8 207 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 SPON2Q9BUD6 331 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 IGFLR1Q9H665 355 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 TASP1Q9H6P5 420 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 DZANK1Q9NVP4 752 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 MID2Q9UJV3 735 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 ANKRD6Q9Y2G4 727 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 NUMBLQ9Y6R0 609 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 MIA3Q5JRA6 1907 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 FAM95CA0A1B0GW59 222 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 HNRNPCL1O60812 293 aaKnown RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 SIN3BO75182 1162 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 PAPSS2O95340 614 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 ATP6V1G2O95670 118 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 APOA4P06727 396 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 KRT16P08779 473 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 HNRNPA1P09651 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
LRP1-202ENST00000338962 IRF1P10914 325 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 FOSL2P15408 326 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 STMN1P16949 149 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 HOXB8P17481 243 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 HOXD9P28356 352 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 PPP3CCP48454 512 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 POLD2P49005 469 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 RAB10P61026 200 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 CDK18Q07002 472 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 SLC12A1Q13621 1099 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 ADGRF1Q5T601 910 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 TSTD2Q5T7W7 516 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 C2CD4AQ8NCU7 369 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 OR7D4Q8NG98 312 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 INPP5DQ92835 1189 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 TADA1Q96BN2 335 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 PRICKLE1Q96MT3 831 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 RAB3IPQ96QF0 476 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 GKN1Q9NS71 199 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 FBXO5Q9UKT4 447 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 STK38LQ9Y2H1 464 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 MYO9BQ13459 2157 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 MYLKQ15746 1914 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.15□□□□□ -0.62
LRP1-202ENST00000338962 A0A1B0GVM2 712 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 LOC285095A0A1B0GVY8 99 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 TCAF2A6NFQ2 919 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 LINC01565O15544 149 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 ITM2AO43736 263 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 LYPLA1O75608 230 aaPredicted RBP11.15□□□□□ -0.62
LRP1-202ENST00000338962 KLKB1P03952 638 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 SERPINF2P08697 491 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 SLC35E2BP0CK96 405 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 T-ENOLP0DO92 83 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 HLA-DPA1P20036 260 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 LTBRP36941 435 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 AVPR1AP37288 418 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 SLC12A2P55011 1212 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 OXCT1P55809 520 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 TWF1Q12792 350 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 ZNF177Q13360 481 aaPredicted RBP11.15□□□□□ -0.62
LRP1-202ENST00000338962 IHHQ14623 411 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 SLC41A1Q8IVJ1 513 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 RSRC1Q96IZ7 334 aaKnown RBP11.15□□□□□ -0.62
LRP1-202ENST00000338962 RILPQ96NA2 401 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 TUBB6Q9BUF5 446 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 RNF38Q9H0F5 515 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 CLEC1BQ9P126 229 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 CPSF2Q9P2I0 782 aaKnown RBP11.15□□□□□ -0.62
LRP1-202ENST00000338962 SEPT3Q9UH03 358 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 DNAJC16Q9Y2G8 782 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 ACOT9Q9Y305 439 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 ASB3Q9Y575 518 aa11.15□□□□□ -0.62
LRP1-202ENST00000338962 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.63
LRP1-202ENST00000338962 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 FCHO1O14526 889 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 MUSKO15146 869 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 GJB3O75712 270 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 FGF1P05230 155 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 RHOCP08134 193 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 ATXN1LP0C7T5 689 aaKnown RBP11.14□□□□□ -0.63
LRP1-202ENST00000338962 COL6A2P12110 1019 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 CRABP2P29373 138 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 CSRP3P50461 194 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 EPHB3P54753 998 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 PRAMEP78395 509 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 PPM1LQ5SGD2 360 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 ANKRD54Q6NXT1 300 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 SYCE2Q6PIF2 218 aa11.14□□□□□ -0.63
LRP1-202ENST00000338962 DNAJB7Q7Z6W7 309 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms