RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MBTPS2O43462 519 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FZD6O60353 706 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FAM155BO75949 473 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 INHBAP08476 426 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC8A1P32418 973 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CCNHP51946 323 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MGAT5Q09328 741 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CNGA3Q16281 694 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 QPCTQ16769 361 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TSTD2Q5T7W7 516 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ARMC12Q5T9G4 340 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 KCNMB4Q86W47 210 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RASSF3Q86WH2 238 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SFTPA1Q8IWL2 248 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TERB1Q8NA31 727 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 BRSK1Q8TDC3 778 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FRS2Q8WU20 508 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CDKL2Q92772 493 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CHFRQ96EP1 664 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 STMN4Q9H169 189 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TREX1Q9NSU2 369 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 KCTD3Q9Y597 815 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SPO11Q9Y5K1 396 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 TBC1D3BA6NDS4 549 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MROH6A6NGR9 719 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 C2CD4DB7Z1M9 353 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 LDB2O43679 373 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PGLSO95336 258 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 POP4O95707 220 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 BMP1P13497 986 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 EPHB1P54762 984 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GYS2P54840 703 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ST8SIA6P61647 398 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SMAD4Q13485 552 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 FRG1Q14331 258 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 RASA2Q15283 850 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 AAK1Q2M2I8 961 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PRPF38BQ5VTL8 546 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC26A11Q86WA9 606 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PAF1Q8N7H5 531 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ZNF366Q8N895 744 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 CHST14Q8NCH0 376 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 OR2A12Q8NGT7 310 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 VOPP1Q96AW1 172 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 MTG2Q9H4K7 406 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ZDHHC6Q9H6R6 413 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 PLA2G4CQ9UP65 541 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 SLC8A2Q9UPR5 921 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 ARL5AQ9Y689 179 aa14.84□□□□□ -0.03
CDK5RAP3-201ENST00000338399 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HTRA2O43464 458 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 BUD23O43709 281 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SOCS5O75159 536 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 VAPBO95292 243 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SERPINA4P29622 427 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ATP5DP30049 168 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HPDP32754 393 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 RECQLP46063 649 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SOX9P48436 509 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 VASPP50552 380 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 RAD51Q06609 339 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PTPRRQ15256 657 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HSP90AA5PQ58FG0 334 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ARMC3Q5W041 872 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 MARK2Q7KZI7 788 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PIH1D2Q8WWB5 315 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 IARS2Q9NSE4 1012 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ZFATQ9P243 1243 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 UNC80Q8N2C7 3258 aa14.83□□□□□ -0.04
CDK5RAP3-201ENST00000338399 AURKAO14965 403 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 TIMM44O43615 452 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PAPSS2O95340 614 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CTPS1P17812 591 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 KRT15P19012 456 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PAMP19021 973 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ABL2P42684 1182 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ARCN1P48444 511 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CBX1P83916 185 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PTPRCAPQ14761 206 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 EIF4HQ15056 248 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 FNDC3BQ53EP0 1204 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 TEDDM1Q5T9Z0 273 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PDPK2PQ6A1A2 396 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ZNF449Q6P9G9 518 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 NLRP9Q7RTR0 991 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 GLT6D1Q7Z4J2 308 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 EXOC3L1Q86VI1 746 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PLPP6Q8IY26 295 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 MDGA1Q8NFP4 955 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 OR13J1Q8NGT2 312 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 FAM76AQ8TAV0 307 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CSGALNACT1Q8TDX6 532 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 AGAP2Q99490 1192 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CPEB1Q9BZB8 566 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PSAT1Q9Y617 370 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 KAT7O95251 611 aa14.82□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CRTAMO95727 393 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms