RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 WNT3AP56704 352 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 POLR2LP62875 67 aaKnown RBP16.14■□□□□ 0.17
LRRC28-202ENST00000331450 CDK18Q07002 472 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 RALGDSQ12967 914 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 PCSK7Q16549 785 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 PLK5Q496M5 336 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 FAXCQ5TGI0 409 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 C4orf22Q6V702 233 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 GSTA5Q7RTV2 222 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 TTC7BQ86TV6 843 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 ABCA7Q8IZY2 2146 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 SPATA4Q8NEY3 305 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 CADM4Q8NFZ8 388 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 GRK7Q8WTQ7 553 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 IRF2BPLQ9H1B7 796 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 EPC1Q9H2F5 836 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 C6orf106Q9H6K1 298 aaPredicted RBP16.14■□□□□ 0.17
LRRC28-202ENST00000331450 AAR2Q9Y312 384 aaKnown RBP16.14■□□□□ 0.17
LRRC28-202ENST00000331450 TRPM6Q9BX84 2022 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 A0A0J9YYE9 177 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 CAPN8A6NHC0 703 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 LRRC72A6NJI9 287 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TSPAN6O43657 245 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 NDST3O95803 873 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TRBC1P01850 177 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 PRKCGP05129 697 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 ATXN1LP0C7T5 689 aaKnown RBP16.13■□□□□ 0.17
LRRC28-202ENST00000331450 ACTN2P35609 894 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 FDFT1P37268 417 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 PTGIRP43119 386 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 PPP2CBP62714 309 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 PPP2CAP67775 309 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 RPL6Q02878 288 aaKnown RBP16.13■□□□□ 0.17
LRRC28-202ENST00000331450 ELP6Q0PNE2 266 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 SEMA5AQ13591 1074 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TUBB2AQ13885 445 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 GALNT3Q14435 633 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 PRPSAP1Q14558 356 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 KCTD19Q17RG1 926 aaPredicted RBP16.13■□□□□ 0.17
LRRC28-202ENST00000331450 WHAMMP3Q1A5X7 153 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TMEM52BQ4KMG9 183 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TMEM259Q4ZIN3 620 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 SPDYCQ5MJ68 293 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 NEK5Q6P3R8 708 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 DPPA4Q7L190 304 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TRIM69Q86WT6 500 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 SLC41A1Q8IVJ1 513 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 LPCAT1Q8NF37 534 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 IPMKQ8NFU5 416 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 SCRN2Q96FV2 425 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TUBB2BQ9BVA1 445 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 ADGRE3Q9BY15 652 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 ETNK1Q9HBU6 452 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
LRRC28-202ENST00000331450 ZFR2Q9UPR6 939 aaKnown RBP16.13■□□□□ 0.17
LRRC28-202ENST00000331450 HCN4Q9Y3Q4 1203 aa16.13■□□□□ 0.17
LRRC28-202ENST00000331450 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-202ENST00000331450 NPIPB15A6NHN6 443 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-202ENST00000331450 ANKRD66B4E2M5 251 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 LATO43561 262 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 NDUFS2O75306 463 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 ECEL1O95672 775 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 AP2A1O95782 977 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 GAS8O95995 478 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 KRT14P02533 472 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 XPAP23025 273 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-202ENST00000331450 NBL1P41271 181 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 CCR5P51681 352 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 CKAP4Q07065 602 aaKnown RBP16.12■□□□□ 0.17
LRRC28-202ENST00000331450 QPCTQ16769 361 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 KIAA0895LQ68EN5 471 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 RANBP10Q6VN20 620 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 USP45Q70EL2 814 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 PAF1Q8N7H5 531 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 IFT43Q96FT9 208 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 RUNDC3BQ96NL0 473 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 SMIM14Q96QK8 99 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 LYSMD1Q96S90 227 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 FSD1LQ9BXM9 530 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 RAB6BQ9NRW1 208 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 B4GALT6Q9UBX8 382 aa16.12■□□□□ 0.17
LRRC28-202ENST00000331450 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3DA0A087WVF3 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3IA0A087WXS9 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3EA0A087X179 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3KA0A087X1G2 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3FA6NER0 549 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 FAM47DPA6NHR8 397 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 ERI2A8K979 691 aaKnown RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 METTL12A8MUP2 240 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3LB9A6J9 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 MAP3K13O43283 966 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 RNGTTO60942 597 aaKnown RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 ALPIP09923 528 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3HP0C7X1 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 CTPS1P17812 591 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 HLA-DPA1P20036 260 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms