RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SLC27A6Q9Y2P4 619 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 ABCC3O15438 1527 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 SLITRK3O94933 977 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 BNC1Q01954 994 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 USP41Q3LFD5 358 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 RBM43Q6ZSC3 357 aaKnown RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 SLC9A9Q8IVB4 645 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 C4orf19Q8IY42 314 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 HDAC7Q8WUI4 952 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 WDR60Q8WVS4 1066 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 SYN2Q92777 582 aaPredicted RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 MECRQ9BV79 373 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 GANQ9H2C0 597 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 RXFP1Q9HBX9 757 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 SGK2Q9HBY8 427 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 TRIM64A6NGJ6 449 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 SNUPNO95149 360 aaKnown RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 LSM8O95777 96 aaKnown RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 ACADSP16219 412 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 EFNA1P20827 205 aaPredicted RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 CYP4F8P98187 520 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 NAB1Q13506 487 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 MYBPC2Q14324 1141 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 FAM187BQ17R55 369 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 PABPC1LQ4VXU2 614 aaKnown RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 RAVER1Q8IY67 606 aaKnown RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 ZNF433Q8N7K0 673 aaPredicted RBP10.62□□□□□ -0.71
CLN8-201ENST00000331222 OR5M3Q8NGP4 307 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 KBTBD7Q8WVZ9 684 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 PDCD2LQ9BRP1 358 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 GOLGA2P5Q9HBQ8 144 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 RASSF1Q9NS23 344 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 THAP1Q9NVV9 213 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 ING3Q9NXR8 418 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 TAS2R14Q9NYV8 317 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 TPRKBQ9Y3C4 175 aa10.62□□□□□ -0.71
CLN8-201ENST00000331222 CYP3A4P08684 503 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 RARAP10276 462 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 PECAM1P16284 738 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 NPR3P17342 541 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 MC4RP32245 332 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 ZNF75CPQ92670 426 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 TBCBQ99426 244 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 ZNF432O94892 652 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 GRIA4P48058 902 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 RARRES1P49788 294 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 UAP1L1Q3KQV9 507 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLN8-201ENST00000331222 IRGCQ6NXR0 463 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 PTGR2Q8N8N7 351 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 GMCL1P1Q8NEA9 526 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 KLHL5Q96PQ7 755 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 SLC26A4O43511 780 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 RGS20O76081 388 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 OR1D2P34982 312 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 PPM1AP35813 382 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 SLC26A2P50443 739 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 DPYSL3Q14195 570 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 CCNYL2Q5T2Q4 361 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 ZNF540Q8NDQ6 660 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 OR8D1Q8WZ84 308 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 NELL1Q92832 810 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 DNASE1L2Q92874 299 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 CEP295NLQ96MC4 621 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 FRMD8Q9BZ67 464 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 ZYG11BQ9C0D3 744 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 ZNF518BQ9C0D4 1074 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 PCDH9Q9HC56 1237 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 MCCC2Q9HCC0 563 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 INTS7Q9NVH2 962 aaKnown RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 ELOVL2Q9NXB9 296 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 POLR3HQ9Y535 204 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 CACNB4O00305 520 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 SLC31A1O15431 190 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 CATP04040 527 aaKnown RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 SERPINE1P05121 402 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 SAGP10523 405 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 SLC30A6Q6NXT4 461 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 TEX47Q8TBZ9 253 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 GAL3ST3Q96A11 431 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 LENG1Q96BZ8 264 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 MTMR8Q96EF0 704 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 SLC38A2Q96QD8 506 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 FAIM2Q9BWQ8 316 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 FAM192AQ9GZU8 254 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 IKZF2Q9UKS7 526 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 NRP2O60462 931 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 ATP6V1G2O95670 118 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 CST1P01037 141 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 ANXA6P08133 673 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 SCNN1AP37088 669 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLN8-201ENST00000331222 PSMD5Q16401 504 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 MAPKAPK3Q16644 382 aa10.61□□□□□ -0.71
CLN8-201ENST00000331222 EARS2Q5JPH6 523 aaKnown RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 LDB1Q86U70 411 aaPredicted RBP10.61□□□□□ -0.71
CLN8-201ENST00000331222 PSTKQ8IV42 348 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms