RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CYP4F2P78329 520 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 DUPD1Q68J44 220 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 APTXQ7Z2E3 356 aaKnown RBP10.23□□□□□ -0.77
CHD3-201ENST00000330494 CDK20Q8IZL9 346 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 CSPG4P5Q96PW8 444 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 PNPOQ9NVS9 261 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 PTPRJQ12913 1337 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 BCL9LQ86UU0 1499 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 COL1A2P08123 1366 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 NFAT5O94916 1531 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 CLPTM1O96005 669 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 CATP04040 527 aaKnown RBP10.23□□□□□ -0.77
CHD3-201ENST00000330494 INHAP05111 366 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 SH3PXD2AQ5TCZ1 1133 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 LRRC74BQ6ZQY2 392 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.23□□□□□ -0.77
CHD3-201ENST00000330494 SLC24A5Q71RS6 500 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 RASAL3Q86YV0 1011 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 PARP8Q8N3A8 854 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 MAGEC3Q8TD91 643 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 ZNF384Q8TF68 577 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 CYP2S1Q96SQ9 504 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 KLHL1Q9NR64 748 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 XPR1Q9UBH6 696 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 LYVE1Q9Y5Y7 322 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 RGPD5Q99666 1765 aa10.23□□□□□ -0.77
CHD3-201ENST00000330494 MYH7P12883 1935 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ME2P23368 584 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 GRIA3P42263 894 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 INAQ16352 499 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 TMEM63BQ5T3F8 832 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PPP1R14AQ96A00 147 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 IGLV3-22A0A075B6J6 115 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 KANSL1LA0AUZ9 987 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 MYBPHLA2RUH7 354 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 CHURC1-FNTBB4DL54 471 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 GLUD2P49448 558 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 EIF2B5Q13144 721 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 TRMT5Q32P41 509 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 CKAP2Q8WWK9 683 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 LDLRP01130 860 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 SOX6P35712 828 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 CDK7P50613 346 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ADARP55265 1226 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 DCBLD1Q8N8Z6 715 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 SNX6Q9UNH7 406 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 TTC24A2A3L6 582 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 CILPO75339 1184 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ITPKAP23677 461 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 CYP2C18P33260 490 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 CXCR3P49682 368 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 DSC2Q02487 901 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 RPL10LQ96L21 214 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 BDH2Q9BUT1 245 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 IMP3Q9NV31 184 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 ASF1AQ9Y294 204 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PRKAB1Q9Y478 270 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 MYH11P35749 1972 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 DDX3YO15523 660 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 CNOT3O75175 753 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 CLCN5P51795 746 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 NRG1Q02297 640 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 BST1Q10588 318 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 SNX30Q5VWJ9 437 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ALKBH2Q6NS38 261 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 CASP12Q6UXS9 341 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 LRRC39Q96DD0 335 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 MCRS1Q96EZ8 462 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ADPRHL2Q9NX46 363 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 AP4S1Q9Y587 144 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PCDHGA4Q9Y5G9 962 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ZMYM2Q9UBW7 1377 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 COL14A1Q05707 1796 aaKnown RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 A0A0G2JLL6 359 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 ASNA1O43681 348 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 FKBP6O75344 327 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 UGT2B4P06133 528 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PRKAA2P54646 552 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 FKBP1BP68106 108 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 RSBN1Q5VWQ0 802 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 BBS12Q6ZW61 710 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PRRT2Q7Z6L0 340 aaPredicted RBP10.22□□□□□ -0.77
CHD3-201ENST00000330494 EXOC3L1Q86VI1 746 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 OR4K2Q8NGD2 314 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 AUTS2Q8WXX7 1259 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 TFAP2BQ92481 460 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PROX1Q92786 737 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 DCUN1D5Q9BTE7 237 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 VPS51Q9UID3 782 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PCDHA2Q9Y5H9 948 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 PTCH2Q9Y6C5 1203 aa10.22□□□□□ -0.77
CHD3-201ENST00000330494 ENPP3O14638 875 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 OR10H2O60403 315 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 HLA-DQA2P01906 255 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 FYNP06241 537 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 CRHR2Q13324 411 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 NAB1Q13506 487 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms