RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 ALG11Q2TAA5 492 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 ZNF605Q86T29 641 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 PAF1Q8N7H5 531 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 EDEM3Q9BZQ6 932 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 LMBRD1Q9NUN5 540 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 KLQ9UEF7 1012 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 OR1A2Q9Y585 309 aa25.26■■□□□ 1.63
PPP4R4-202ENST00000328839 J3KR12 359 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 TNFSF15O95150 251 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 PRKCGP05129 697 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 CDK11BP21127 795 aaKnown RBP25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 LIG3P49916 1009 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 NFATC4Q14934 902 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 CAMK1DQ8IU85 385 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 HCAR2Q8TDS4 363 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 CCDC74AQ96AQ1 378 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 CCDC97Q96F63 343 aaPredicted RBP25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 PRR11Q96HE9 360 aaPredicted RBP25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 APOOQ9BUR5 198 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 LIMA1Q9UHB6 759 aaKnown RBP25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 GPR34Q9UPC5 381 aa25.25■■□□□ 1.63
PPP4R4-202ENST00000328839 ATMQ13315 3056 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 CCDC187A0A096LP49 1063 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 TSPAN11A1L157 253 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 PDX1P52945 283 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 SRP54P61011 504 aaKnown RBP25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 VAC14Q08AM6 782 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 PPP1R15BQ5SWA1 713 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 BRAT1Q6PJG6 821 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 NYAP1Q6ZVC0 841 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 GKN2Q86XP6 184 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 MCOLN2Q8IZK6 566 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 ATL2Q8NHH9 583 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 ZNF641Q96N77 438 aaPredicted RBP25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 LRRC19Q9H756 370 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 PDFQ9HBH1 243 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 EPB41L5Q9HCM4 733 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 DONSONQ9NYP3 566 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 AP4E1Q9UPM8 1137 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 ATP8A1Q9Y2Q0 1164 aa25.24■■□□□ 1.63
PPP4R4-202ENST00000328839 BUB1BO60566 1050 aaPredicted RBP25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 PRAMEF11O60813 436 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 MMP12P39900 470 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 NDST2P52849 883 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 MYL5Q02045 173 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 OGDHQ02218 1023 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 ACAD10Q6JQN1 1059 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 LVRNQ6Q4G3 990 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 SASS6Q6UVJ0 657 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 WDR92Q96MX6 357 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 GFM1Q96RP9 751 aaKnown RBP25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 DHX35Q9H5Z1 703 aaKnown RBP25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 RABGEF1Q9UJ41 708 aa25.23■■□□□ 1.63
PPP4R4-202ENST00000328839 ARHGAP42A6NI28 874 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 CDRT15L2A8MXV6 281 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 TMCO5BA8MYB1 307 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 EEF2KO00418 725 aaKnown RBP25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 DAPK3O43293 454 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 PALMO75781 387 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 CCDC172P0C7W6 258 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 PLA2G2AP14555 144 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 PSMA2P25787 234 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 SERPINA4P29622 427 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 HTR7P34969 479 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 PAPOLAP51003 745 aaKnown RBP25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 ZSWIM9Q86XI8 627 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 SDR16C5Q8N3Y7 309 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 ERGIC2Q96RQ1 377 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 TUBGCP5Q96RT8 1024 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 SLC39A8Q9C0K1 460 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 ATP13A3Q9H7F0 1226 aa25.22■■□□□ 1.63
PPP4R4-202ENST00000328839 HELZ2Q9BYK8 2649 aaKnown RBP25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 NTN3O00634 580 aaPredicted RBP25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 RPLP0P05388 317 aaKnown RBP25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 FERP16591 822 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 RGRP47804 291 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 MTM1Q13496 603 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 ZSCAN23Q3MJ62 389 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 B3GNT8Q7Z7M8 397 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 SRLQ86TD4 932 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 PLA2G15Q8NCC3 412 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 TSEN2Q8NCE0 465 aaKnown RBP25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 PDXPQ96GD0 296 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 CINPQ9BW66 212 aaPredicted RBP25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 FOXP3Q9BZS1 431 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 SP110Q9HB58 689 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 ANO10Q9NW15 660 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 TAS2R14Q9NYV8 317 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 PCSK1NQ9UHG2 260 aa25.21■■□□□ 1.63
PPP4R4-202ENST00000328839 ATMINO43313 823 aaPredicted RBP25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 TNFP01375 233 aa25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 TNFAIP3P21580 790 aa25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 CCL7P80098 99 aa25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 SKOR1P84550 965 aa25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 STX1AQ16623 288 aa25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 CA9Q16790 459 aa25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 RBM43Q6ZSC3 357 aaKnown RBP25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 LIN37Q96GY3 246 aaPredicted RBP25.2■■□□□ 1.62
PPP4R4-202ENST00000328839 CAPN8A6NHC0 703 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms