RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 MTX3Q5HYI7 312 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 CAPN13Q6MZZ7 669 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ST6GALNAC4Q9H4F1 302 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 CCDC166P0CW27 439 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 IL12AP29459 219 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 RIPPLY1Q0D2K3 151 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 SERPINA13PQ6UXR4 307 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 OAFQ86UD1 273 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ARMC8Q8IUR7 673 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 OR4L1Q8NH43 312 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 TCF12Q99081 682 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 AIF1LQ9BQI0 150 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 C6orf62Q9GZU0 229 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 TRIM17Q9Y577 477 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 CCDC162PA2VCL2 907 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 PLK4O00444 970 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 AZIN1O14977 448 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ALOX5P09917 674 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 PRG2P13727 222 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 NOMO3P69849 1222 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 VGLL4Q14135 290 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 GJC2Q5T442 439 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 RPTNQ6XPR3 784 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 BEND5Q7L4P6 421 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 NATD1Q8N6N6 113 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 RHOBTB2Q9BYZ6 727 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ALG9Q9H6U8 611 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 OR10H1Q9Y4A9 318 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 TIMM13Q9Y5L4 95 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 SYN3O14994 580 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ALOX15BO15296 676 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 CCNYL3P0C7X3 344 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 MLH1P40692 756 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 RPP38P78345 283 aaKnown RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 MTAPQ13126 283 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 TBC1D21Q8IYX1 336 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 SMYD1Q8NB12 490 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 MYO19Q96H55 970 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 FNDC11Q9BVV2 318 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 BRD9Q9H8M2 597 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 CCDC167Q9P0B6 97 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ZNF624Q9P2J8 865 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 ASTN1O14525 1302 aa13.38□□□□□ -0.27
TRAK1-201ENST00000327628 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
TRAK1-201ENST00000327628 DCXO43602 365 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 NR2F1P10589 423 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RAB2AP61019 212 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RAP1GAP2Q684P5 730 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 PHF10Q8WUB8 498 aaKnown RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 ASZ1Q8WWH4 475 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 KAT5Q92993 513 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 NACC2Q96BF6 587 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RTKNQ9BST9 563 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RNPEPL1Q9HAU8 725 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 SMPD4Q9NXE4 827 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 IKZF3Q9UKT9 509 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 EIF4E1BA6NMX2 242 aaKnown RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 KCNK1O00180 336 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 UNC5CO95185 931 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 MAP3K6O95382 1288 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 DNTTP04053 509 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 APODP05090 189 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 CTNNB1P35222 781 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 DCTN2Q13561 401 aaKnown RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 CLVS1Q8IUQ0 354 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 BTBD3Q9Y2F9 522 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 IFNA16P05015 189 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 ERFP50548 548 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RPS6KA3P51812 740 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 PLK1P53350 603 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 TRIM25Q14258 630 aaKnown RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 FAM35AQ86V20 835 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 OR52K1Q8NGK4 314 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 MBOAT7Q96N66 472 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 CLCC1Q96S66 551 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 SENP6Q9GZR1 1112 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 ERVW-1Q9UQF0 538 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
TRAK1-201ENST00000327628 GLUD1P00367 558 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 TFEBP19484 476 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 CAPGP40121 348 aa13.37□□□□□ -0.27
TRAK1-201ENST00000327628 PTPN9P43378 593 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms