RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PTTG2Q9NZH5 202 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 SLC2A6Q9UGQ3 507 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 LZTS1Q9Y250 596 aa20.02■□□□□ 0.79
SOX2-201ENST00000325404 CCDC78A2IDD5 438 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 HEATR9A2RTY3 570 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 WASH4PA8MWX3 477 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 LTA4HP09960 611 aaKnown RBP20.01■□□□□ 0.79
SOX2-201ENST00000325404 CCR1P32246 355 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 LRP8Q14114 963 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 ACAP2Q15057 778 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 UPP1Q16831 310 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 BTBD8Q5XKL5 378 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 CCSAPQ6IQ19 270 aaPredicted RBP20.01■□□□□ 0.79
SOX2-201ENST00000325404 METTL23Q86XA0 190 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 KLHL32Q96NJ5 620 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 NPAS2Q99743 824 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 SMOC2Q9H3U7 446 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 ATP13A1Q9HD20 1204 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 RBM22Q9NW64 420 aaKnown RBP eCLIP20.01■□□□□ 0.79
SOX2-201ENST00000325404 PAGE1O75459 146 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 HLA-DQB2P05538 268 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 PGGT1BP53609 377 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 BORAQ6PGQ7 559 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 SPATA24Q86W54 205 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 SLC25A51Q9H1U9 297 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 ETAA1Q9NY74 926 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 GTSE1Q9NYZ3 720 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 DSEQ9UL01 958 aa20.01■□□□□ 0.79
SOX2-201ENST00000325404 TRIM24O15164 1050 aa20■□□□□ 0.79
SOX2-201ENST00000325404 TRPA1O75762 1119 aa20■□□□□ 0.79
SOX2-201ENST00000325404 FAM58BPP0C7Q3 252 aa20■□□□□ 0.79
SOX2-201ENST00000325404 RHDQ02161 417 aa20■□□□□ 0.79
SOX2-201ENST00000325404 MGAT3Q09327 533 aa20■□□□□ 0.79
SOX2-201ENST00000325404 MAPRE1Q15691 268 aaKnown RBP20■□□□□ 0.79
SOX2-201ENST00000325404 TIGD5Q53EQ6 642 aa20■□□□□ 0.79
SOX2-201ENST00000325404 CD99L2Q8TCZ2 262 aa20■□□□□ 0.79
SOX2-201ENST00000325404 TMA16Q96EY4 203 aaKnown RBP20■□□□□ 0.79
SOX2-201ENST00000325404 UBXN10Q96LJ8 280 aa20■□□□□ 0.79
SOX2-201ENST00000325404 CFHR5Q9BXR6 569 aa20■□□□□ 0.79
SOX2-201ENST00000325404 MIOSQ9NXC5 875 aa20■□□□□ 0.79
SOX2-201ENST00000325404 CACNA2D2Q9NY47 1150 aa20■□□□□ 0.79
SOX2-201ENST00000325404 A8MT66 165 aa20■□□□□ 0.79
SOX2-201ENST00000325404 TMEM233B4DJY2 109 aa20■□□□□ 0.79
SOX2-201ENST00000325404 PDLIM1O00151 329 aa20■□□□□ 0.79
SOX2-201ENST00000325404 PSMD12O00232 456 aaPredicted RBP20■□□□□ 0.79
SOX2-201ENST00000325404 UBDO15205 165 aa20■□□□□ 0.79
SOX2-201ENST00000325404 THPOP40225 353 aa20■□□□□ 0.79
SOX2-201ENST00000325404 APOFQ13790 326 aa20■□□□□ 0.79
SOX2-201ENST00000325404 KDELC1Q6UW63 502 aa20■□□□□ 0.79
SOX2-201ENST00000325404 MRPL10Q7Z7H8 261 aaKnown RBP20■□□□□ 0.79
SOX2-201ENST00000325404 UHRF1Q96T88 793 aaPredicted RBP20■□□□□ 0.79
SOX2-201ENST00000325404 SIK2Q9H0K1 926 aa20■□□□□ 0.79
SOX2-201ENST00000325404 ARL5CA6NH57 179 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 MEIS3P2A8K0S8 358 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 STX16-NPEPL1H3BU86 382 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 GPR182O15218 404 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 RNASEH2AO75792 299 aaKnown RBP19.99■□□□□ 0.79
SOX2-201ENST00000325404 ZNF26P17031 533 aaPredicted RBP19.99■□□□□ 0.79
SOX2-201ENST00000325404 BDNFP23560 247 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 ACADVLP49748 655 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 FAM45BPQ6NSW5 357 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 RTL3Q8N8U3 475 aaKnown RBP19.99■□□□□ 0.79
SOX2-201ENST00000325404 FAM45AQ8TCE6 357 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 MARK4Q96L34 752 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 SLC25A23Q9BV35 468 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 VPS45Q9NRW7 570 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 AP4S1Q9Y587 144 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 KCNU1A8MYU2 1149 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 MYBPC1Q00872 1141 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 SLC5A9Q2M3M2 681 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 GK5Q6ZS86 529 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 RNF180Q86T96 592 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 CUZD1Q86UP6 607 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 FCRL2Q96LA5 508 aaPredicted RBP19.99■□□□□ 0.79
SOX2-201ENST00000325404 NDNQ99608 321 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 RHOBTB2Q9BYZ6 727 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 CREBZFQ9NS37 354 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 ADA2Q9NZK5 511 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 CACNG4Q9UBN1 327 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 CD300AQ9UGN4 299 aa19.99■□□□□ 0.79
SOX2-201ENST00000325404 CENPFP49454 3210 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 PMPCBO75439 489 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 WISP3O95389 354 aaPredicted RBP19.98■□□□□ 0.79
SOX2-201ENST00000325404 WNT3AP56704 352 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 FASTKQ14296 549 aaKnown RBP19.98■□□□□ 0.79
SOX2-201ENST00000325404 CSHL1Q14406 222 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 C8orf82Q6P1X6 216 aaPredicted RBP19.98■□□□□ 0.79
SOX2-201ENST00000325404 SPATA6LQ8N4H0 392 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 HMGCLL1Q8TB92 370 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 C1orf74Q96LT6 269 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 ZNF597Q96LX8 424 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 SUDS3Q9H7L9 328 aaPredicted RBP19.98■□□□□ 0.79
SOX2-201ENST00000325404 SPAG4Q9NPE6 437 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 TCRBV3S1A0A5B6 114 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 VILLO15195 856 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 SLC7A4O43246 635 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 PGM3O95394 542 aa19.98■□□□□ 0.79
SOX2-201ENST00000325404 SNRPB2P08579 225 aaKnown RBP19.98■□□□□ 0.79
SOX2-201ENST00000325404 HNRNPLP14866 589 aaKnown RBP eCLIP19.98■□□□□ 0.79
SOX2-201ENST00000325404 IMPDH1P20839 514 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms