RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 KIF17Q9P2E2 1029 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 PPME1Q9Y570 386 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 DNAJA2O60884 412 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 IDH3AP50213 366 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 CDH18Q13634 790 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 TBC1D25Q3MII6 688 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 NCBP2-AS2Q69YL0 99 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 ARCQ7LC44 396 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 CAND1Q86VP6 1230 aaKnown RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 ATP6V0D2Q8N8Y2 350 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 HTRA1Q92743 480 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 SNX27Q96L92 541 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 GPATCH1Q9BRR8 931 aaKnown RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 CXorf21Q9HAI6 301 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 TRMT6Q9UJA5 497 aaKnown RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 BLOC1S6Q9UL45 172 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 EFR3BQ9Y2G0 817 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 BCLAF3A2AJT9 711 aaKnown RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 KCNU1A8MYU2 1149 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 HDAC3O15379 428 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 PTPN3P26045 913 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 ALDH4A1P30038 563 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 RECQLP46063 649 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 GABRB2P47870 512 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 RENBPP51606 427 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 KCNK10P57789 538 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 SOX4Q06945 474 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 TLR1Q15399 786 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 MYLK3Q32MK0 819 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 CCDC153Q494R4 210 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 ZFP28Q8NHY6 868 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 BRI3BPQ8WY22 251 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 PTCD3Q96EY7 689 aaKnown RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 TBCDQ9BTW9 1192 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 C6orf62Q9GZU0 229 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 ATP13A1Q9HD20 1204 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 GJA8P48165 433 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 ZNF177Q13360 481 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 TAF2Q6P1X5 1199 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 DRICH1Q6PGQ1 229 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 CHST15Q7LFX5 561 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 PTGR2Q8N8N7 351 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 SNX19Q92543 992 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 LPGAT1Q92604 370 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 CCDC28BQ9BUN5 200 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 PADI3Q9ULW8 664 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 STYXL1Q9Y6J8 313 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 A0A1W2PQH9 124 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 HACD1B0YJ81 288 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 PDLIM1O00151 329 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 SPATA31D3P0C874 917 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 IMPDH2P12268 514 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 CYP3A5P20815 502 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 JAK1P23458 1154 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 AFF1P51825 1210 aaKnown RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 CCL23P55773 120 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 DSC2Q02487 901 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 SPATA31D4Q6ZUB0 917 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 NT5DC4Q86YG4 428 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 PLD6Q8N2A8 252 aaKnown RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 CBR4Q8N4T8 237 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 COX4I2Q96KJ9 171 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 SYT17Q9BSW7 474 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 OXCT2Q9BYC2 517 aaPredicted RBP15.34■□□□□ 0.05
VARS2-201ENST00000321897 PCDH12Q9NPG4 1184 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 ASB3Q9Y575 518 aa15.34■□□□□ 0.05
VARS2-201ENST00000321897 A0A0J9YVX5 310 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 FFAR3O14843 346 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 NCAM2O15394 837 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 GPR42O15529 346 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 STBD1O95210 358 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 SERPINF2P08697 491 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 PTPRCAPQ14761 206 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 NR6A1Q15406 480 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 TIGD5Q53EQ6 642 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 TNIP2Q8NFZ5 429 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 PSMA8Q8TAA3 256 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 BTBD9Q96Q07 612 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 PKP2Q99959 881 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 OSBPL6Q9BZF3 934 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 RUBCNLQ9H714 662 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 NMRK2Q9NPI5 230 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 PDLIM7Q9NR12 457 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 TIMM22Q9Y584 194 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 TRPV2Q9Y5S1 764 aa15.33■□□□□ 0.05
VARS2-201ENST00000321897 ITGAXP20702 1163 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 IL5RAQ01344 420 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 MAP2K5Q13163 448 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 VEPH1Q14D04 833 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 MAPRE1Q15691 268 aaKnown RBP15.33■□□□□ 0.04
VARS2-201ENST00000321897 SLC9B1Q4ZJI4 515 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 OGFOD2Q6N063 350 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 ARHGAP36Q6ZRI8 547 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 TPGS1Q6ZTW0 290 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 CLEC20AQ6ZU45 233 aa15.33■□□□□ 0.04
VARS2-201ENST00000321897 STRADAQ7RTN6 431 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms