RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GINS2Q9Y248 185 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 GPC6Q9Y625 555 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 USP3Q9Y6I4 520 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM95CA0A1B0GW59 222 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 WNT10BO00744 389 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-202ENST00000318266 SULT1C4O75897 302 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 IL18RAPO95256 599 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 AP2A1O95782 977 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 EGFRP00533 1210 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 STMN1P16949 149 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 IDUAP35475 653 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 OPRL1P41146 370 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 PTPN9P43378 593 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 ACADVLP49748 655 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 CDH13P55290 713 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 SPIDRQ14159 915 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 SQLEQ14534 574 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 MXD4Q14582 209 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-202ENST00000318266 MAPK11Q15759 364 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 PGS1Q32NB8 556 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 SLC36A3Q495N2 470 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 TMEM110Q86TL2 294 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 GPC2Q8N158 579 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.85
PTPRA-202ENST00000318266 GLT1D1Q96MS3 346 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 MLPHQ9BV36 600 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-202ENST00000318266 KLHL25Q9H0H3 589 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 ATXN3LQ9H3M9 355 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 PDZD7Q9H5P4 517 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 LTB4R2Q9NPC1 389 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 TUBA8Q9NY65 449 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-202ENST00000318266 SPATA7Q9P0W8 599 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 TMEM181Q9P2C4 612 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 ERGIC3Q9Y282 383 aa9.71□□□□□ -0.85
PTPRA-202ENST00000318266 HACD1B0YJ81 288 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 EEF2KO00418 725 aaKnown RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 LSM1O15116 133 aaKnown RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 RAD23AP54725 363 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 TAS2R39P59534 338 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 TRAP1Q12931 704 aaKnown RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 ZBTB17Q13105 803 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 MAPRE2Q15555 327 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 FAM160B1Q5W0V3 765 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 EFCAB12Q6NXP0 572 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SLC2A7Q6PXP3 512 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 NANOGNBQ7Z5D8 188 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 CUZD1Q86UP6 607 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 RAVER1Q8IY67 606 aaKnown RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SPATA22Q8NHS9 363 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 DNAJB14Q8TBM8 379 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SEPT8Q92599 483 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SLC25A23Q9BV35 468 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 RHOJQ9H4E5 214 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 PKD2L2Q9NZM6 624 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 BAIAP3O94812 1187 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SLC12A2P55011 1212 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 STX1BP61266 288 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 OTOP3Q7RTS5 596 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF420Q8TAQ5 688 aaPredicted RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SLC7A14Q8TBB6 771 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 CELF6Q96J87 481 aaKnown RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 UHRF1Q96T88 793 aaPredicted RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 ING2Q9H160 280 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 MRPL46Q9H2W6 279 aaKnown RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 POLE4Q9NR33 117 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 CCM2LQ9NUG4 571 aaPredicted RBP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 TBC1D13Q9NVG8 400 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SLC2A6Q9UGQ3 507 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 SNX10Q9Y5X0 201 aa9.71□□□□□ -0.86
PTPRA-202ENST00000318266 TARM1B6A8C7 271 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 M0QYT0 321 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF701M0R085 212 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SYNCRIPO60506 623 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 CNOT3O75175 753 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 XYLBO75191 536 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 JCHAINP01591 159 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 BDNFP23560 247 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 ALDH4A1P30038 563 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 CD68P34810 354 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 RAB10P61026 200 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 LSM3P62310 102 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 INPP5AQ14642 412 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 IMPG1Q17R60 797 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 FAM117BQ6P1L5 589 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 FUNDC1Q8IVP5 155 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 RDH11Q8TC12 318 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SNX19Q92543 992 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MAELQ96JY0 434 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 C3orf30Q96M34 536 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MUS81Q96NY9 551 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 CSF3RQ99062 836 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 C9orf16Q9BUW7 83 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 CCDC68Q9H2F9 335 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 AGPAT4Q9NRZ5 378 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms