RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 IFNKQ9P0W0 207 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 ANAPC7Q9UJX3 599 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 PKD1L2Q7Z442 2459 aa17.89■□□□□ 0.45
TPM1-203ENST00000317516 ANKRD11Q6UB99 2663 aaPredicted RBP17.88■□□□□ 0.45
TPM1-203ENST00000317516 PLXNB3Q9ULL4 1909 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 DOCK9Q9BZ29 2069 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 A0A087X0T9 212 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 OPA1O60313 960 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 CYP1A2P05177 515 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 ANXA6P08133 673 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 FAM228BP0C875 321 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 AMPD1P23109 780 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 NFKBIAP25963 317 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 MMP12P39900 470 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 SSR1P43307 286 aaKnown RBP17.88■□□□□ 0.45
TPM1-203ENST00000317516 RGRP47804 291 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 KRT81Q14533 505 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 ZNF235Q14590 738 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 IRF4Q15306 451 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 DEFB133Q30KQ1 61 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 TPRG1LQ5T0D9 272 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 ARHGAP36Q6ZRI8 547 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 LRRC49Q8IUZ0 686 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 SCG3Q8WXD2 468 aaKnown RBP17.88■□□□□ 0.45
TPM1-203ENST00000317516 ECHDC3Q96DC8 303 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 CSPG4P5Q96PW8 444 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 SCUBE2Q9NQ36 999 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 DOLKQ9UPQ8 538 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 COQ6Q9Y2Z9 468 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 ARID1BQ8NFD5 2236 aaPredicted RBP17.88■□□□□ 0.45
TPM1-203ENST00000317516 ACACAQ13085 2346 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 SPEGQ15772 3267 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 FAM208BQ5VWN6 2430 aa17.88■□□□□ 0.45
TPM1-203ENST00000317516 CFAP47Q6ZTR5 3102 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 LMO7DNF2Z398 122 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 CTSEP14091 401 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 ADKP55263 362 aaKnown RBP17.87■□□□□ 0.45
TPM1-203ENST00000317516 SEMG2Q02383 582 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 SLC10A7Q0GE19 358 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 INPP5AQ14642 412 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 ELOCQ15369 112 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 NR0B2Q15466 257 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 C19orf48Q6RUI8 117 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 KDM7AQ6ZMT4 941 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 SDR16C5Q8N3Y7 309 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 FSTL5Q8N475 847 aaPredicted RBP17.87■□□□□ 0.45
TPM1-203ENST00000317516 TPCN2Q8NHX9 752 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 IFI44Q8TCB0 444 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 MAPK15Q8TD08 544 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 HNRNPLLQ8WVV9 542 aaKnown RBP17.87■□□□□ 0.45
TPM1-203ENST00000317516 DEPDC7Q96QD5 511 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 APOOQ9BUR5 198 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 RCOR3Q9P2K3 495 aaPredicted RBP17.87■□□□□ 0.45
TPM1-203ENST00000317516 LCMT1Q9UIC8 334 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 PTPRBP23467 1997 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 ZZEF1O43149 2961 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 DMXL2Q8TDJ6 3036 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 APC2O95996 2303 aa17.87■□□□□ 0.45
TPM1-203ENST00000317516 A0A087WV48 116 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 CPED1A4D0V7 1026 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 RASGRP1O95267 797 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 GYPCP04921 128 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ALPIP09923 528 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ELFN1P0C7U0 828 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 CASP14P31944 242 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 MTM1Q13496 603 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 C1orf61Q13536 156 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 NFATC4Q14934 902 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 CDKN3Q16667 212 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ZSCAN23Q3MJ62 389 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ESRP1Q6NXG1 681 aaKnown RBP17.86■□□□□ 0.45
TPM1-203ENST00000317516 LVRNQ6Q4G3 990 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ENPP7Q6UWV6 458 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ZSWIM9Q86XI8 627 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 RBFAQ8N0V3 343 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 ATPAF2Q8N5M1 289 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 BTBD6Q96KE9 485 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 CAAP1Q9H8G2 361 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 PCDH18Q9HCL0 1135 aa17.86■□□□□ 0.45
TPM1-203ENST00000317516 RALYQ9UKM9 306 aaKnown RBP17.86■□□□□ 0.45
TPM1-203ENST00000317516 LY6G6EA0A0G2JKS1 128 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 EME2A4GXA9 379 aaPredicted RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 TRAFD1O14545 582 aaPredicted RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 MUSKO15146 869 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 RRP8O43159 456 aaKnown RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 CBFA2T2O43439 604 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 URB1O60287 2271 aaKnown RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 MAFKO60675 156 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 SOCS5O75159 536 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 GCATO75600 419 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 RECQL5O94762 991 aaPredicted RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 PRKCGP05129 697 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 MYF5P13349 255 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 TCF4P15884 667 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 TSHRP16473 764 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 HK3P52790 923 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 CDH6P55285 790 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 SLC25A11Q02978 314 aaKnown RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 TSR1Q2NL82 804 aaKnown RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 RALGPS1Q5JS13 557 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms