RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 LACC1Q8IV20 430 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ADGRG5Q8IZF4 528 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MIER2Q8N344 545 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLC15A4Q8N697 577 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 MTMR14Q8NCE2 650 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 AGBL3Q8NEM8 1001 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF555Q8NEP9 628 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 FAM149B1Q96BN6 582 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 APBA2Q99767 749 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 C11orf84Q9BUA3 381 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 USE1Q9NZ43 259 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC167Q9P0B6 97 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SEPT10Q9P0V9 454 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 DKK3Q9UBP4 350 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 FBXO5Q9UKT4 447 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 VWA7Q9Y334 891 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC88AQ3V6T2 1871 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 EI24O14681 340 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 LEPRP48357 1165 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CDH8P55286 799 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 KCNK10P57789 538 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM62Q0P6H9 643 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ZC3H12BQ5HYM0 836 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 C6orf10Q5SRN2 563 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ATAD3BQ5T9A4 648 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 SLX4IPQ5VYV7 408 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PKN3Q6P5Z2 889 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PTRH1Q86Y79 214 aaKnown RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 CRYBG2Q8N1P7 616 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 AURKBQ96GD4 344 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 NSMCE2Q96MF7 247 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 PHF12Q96QT6 1004 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 RMND5AQ9H871 391 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 GDAP2Q9NXN4 497 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 KIAA1522Q9P206 1035 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-201ENST00000316707 C3orf18Q9UK00 162 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ERVK-11Q9UQG0 969 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 ST14Q9Y5Y6 855 aa4.81□□□□□ -1.64
PTPN13-201ENST00000316707 DAB1O75553 588 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MAP3K6O95382 1288 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GFAPP14136 432 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF182P17025 639 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CYP2C18P33260 490 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 IREB2P48200 963 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RGS7P49802 495 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 DEFA1P59665 94 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 DEFA3P59666 94 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CHRNB3Q05901 458 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 DAG1Q14118 895 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TRNP1Q6NT89 227 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PROSER1Q86XN7 944 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ANKRD13BQ86YJ7 626 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 OR7A2PQ8NGA2 310 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 HDAC10Q969S8 669 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MFSD3Q96ES6 412 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TNIP3Q96KP6 325 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 C12orf42Q96LP6 360 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 C1QTNF1Q9BXJ1 281 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 NUSAP1Q9BXS6 441 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 LEF1Q9UJU2 399 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 DERAQ9Y315 318 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 H0YIN7 160 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 STAG3L1P0CL83 205 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CYP2B6P20813 491 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GABRB3P28472 473 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ALDH3A2P51648 485 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GEMP55040 296 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GJA9P57773 515 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SLC25A52Q3SY17 297 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PKDCCQ504Y2 493 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SH3PXD2AQ5TCZ1 1133 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 EEF1DP3Q658K8 133 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 JADE1Q6IE81 842 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PLPPR4Q7Z2D5 763 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CHCHD4Q8N4Q1 142 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SMG8Q8ND04 991 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PPHLN1Q8NEY8 458 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TEKT5Q96M29 485 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 NSMCE3Q96MG7 304 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GLT1D1Q96MS3 346 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 KCTD15Q96SI1 283 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 EHD1Q9H4M9 534 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 HOXC10Q9NYD6 342 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 OAZ3Q9UMX2 235 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 USP3Q9Y6I4 520 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF831Q5JPB2 1677 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 KIF13BQ9NQT8 1826 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 COL24A1Q17RW2 1714 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TTC24A2A3L6 582 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FAM47E-STBD1D6RA91 191 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 J3QRK9 145 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PLOD2O00469 737 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ARPC2O15144 300 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TBC1D4O60343 1298 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MAN1A2O60476 641 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TPST1O60507 370 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 APOA1P02647 267 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 UGT2B4P06133 528 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms