RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PTK2BQ14289 1009 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 NCBP2-AS2Q69YL0 99 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC39A5Q6ZMH5 540 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 STRADAQ7RTN6 431 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 TAS1R1Q7RTX1 841 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 LRRC43Q8N309 656 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 LRTOMTQ8WZ04 291 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 SEPT8Q92599 483 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 CNGB3Q9NQW8 809 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 DDIT4Q9NX09 232 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 CNOT11Q9UKZ1 510 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 PCDHB8Q9UN66 801 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 SCN5AQ14524 2016 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 TBKBP1A7MCY6 615 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 JUNP05412 331 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 LIMK2P53671 638 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 PLOD1Q02809 727 aaPredicted RBP17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 CBX3Q13185 183 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 IKBKEQ14164 716 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 ATAD1Q8NBU5 361 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 ZNF669Q96BR6 464 aaPredicted RBP17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 ZNF597Q96LX8 424 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 NAT9Q9BTE0 207 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 SH3GLB1Q9Y371 365 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 PCDHGA4Q9Y5G9 962 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 H3BNH8 94 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 BOLA2-SMG1P6H3BVE0 249 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 TK2O00142 265 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 RNF103O00237 685 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 GRID2O43424 1007 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 C2P06681 752 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 MAGEA10P43363 369 aaPredicted RBP17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC11A1P49279 550 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 CDH15P55291 814 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 C16orf72Q14CZ0 275 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ARL13AQ5H913 290 aaPredicted RBP17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 CPSF7Q8N684 471 aaKnown RBP17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 SMYD1Q8NB12 490 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 PCDHAC1Q9H158 963 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ZNF385DQ9H6B1 395 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ZBTB26Q9HCK0 441 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 FAIMQ9NVQ4 179 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ZDHHC2Q9UIJ5 367 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ADAM28Q9UKQ2 775 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 STAP1Q9ULZ2 295 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 CDYLQ9Y232 598 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 AP4S1Q9Y587 144 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 TFEBP19484 476 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 GRIA4P48058 902 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 CARM1Q86X55 608 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ISL2Q96A47 359 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 RMND5BQ96G75 393 aaPredicted RBP17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 BIRC8Q96P09 236 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 OSBPL11Q9BXB4 747 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 WDR6Q9NNW5 1121 aaKnown RBP17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 ATP11BQ9Y2G3 1177 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC27A5Q9Y2P5 690 aa17.31■□□□□ 0.36
SCAMP4-201ENST00000316097 TRIM38O00635 465 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 H2AFYO75367 372 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC5A3P53794 718 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 DPYSQ14117 519 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 FAM117BQ6P1L5 589 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 RSPO2Q6UXX9 243 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 CLEC14AQ86T13 490 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 PATL1Q86TB9 770 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 CROCCP3Q8IVE0 287 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 PCDH20Q8N6Y1 951 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 ACVR1CQ8NER5 493 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 USP12O75317 370 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 ALDH2P05091 517 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 TYMPP19971 482 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 MTX3Q5HYI7 312 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 SPANXN3Q5MJ09 141 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 ITPRIPL1Q6GPH6 555 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 BNIPLQ7Z465 357 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC29A1Q99808 456 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 ACE2Q9BYF1 805 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 DRC3Q9H069 523 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 PLGRKTQ9HBL7 147 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 OLAHQ9NV23 265 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 SFMBT1Q9UHJ3 866 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 SNX13Q9Y5W8 968 aa17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 COPG1Q9Y678 874 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-201ENST00000316097 SH3PXD2BA1X283 911 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 TCAF2A6NFQ2 919 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 ZNF487B1APH4 448 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 PLOD2O00469 737 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC22A2O15244 555 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 MFSD11O43934 449 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 MPOP05164 745 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 PGGT1BP53609 377 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 NAGLUP54802 743 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms