RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LNPEPQ9UIQ6 1025 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 OGDHLQ9ULD0 1010 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 FIS1Q9Y3D6 152 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 WASF2Q9Y6W5 498 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 MICAL3Q7RTP6 2002 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ANKRD12Q6UB98 2062 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 STC2O76061 302 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 PSMG1O95456 288 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CSF2RAP15509 400 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 NCF2P19878 526 aaPredicted RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 MPSTP25325 297 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 GNA12Q03113 381 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TWF1Q12792 350 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 INSCQ1MX18 579 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CCDC153Q494R4 210 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TSTD2Q5T7W7 516 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 PIM3Q86V86 326 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 MFN1Q8IWA4 741 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 KLHDC8BQ8IXV7 354 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TMEM151AQ8N4L1 468 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CCNYL1Q8N7R7 359 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 PPFIBP2Q8ND30 876 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 MAPK15Q8TD08 544 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 SAR1AQ9NR31 198 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.51□□□□□ -0.41
RNF4-201ENST00000314289 TAS2R1Q9NYW7 299 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ACOT9Q9Y305 439 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ASB3Q9Y575 518 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 HEATR9A2RTY3 570 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 B2RBV5 119 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 E9PBE3 544 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 KLHL41O60662 606 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 PRAMEF11O60813 436 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 CXCL10P02778 98 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 ATXN1LP0C7T5 689 aaKnown RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 HOXD9P28356 352 aaPredicted RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 CD151P48509 253 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 TUFMP49411 452 aaKnown RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 RAB10P61026 200 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 PRAMEP78395 509 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 IL10RBQ08334 325 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 OR52E8Q6IFG1 317 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 SHKBP1Q8TBC3 707 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 ISL2Q96A47 359 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 CLPTM1LQ96KA5 538 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 DNAJC1Q96KC8 554 aaKnown RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 POLR1EQ9GZS1 481 aaKnown RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 TLE6Q9H808 572 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 YIPF1Q9Y548 306 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 LOC100653049A0A140TA62 436 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 AP3B1O00203 1094 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 SNAP91O60641 907 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 ZMPSTE24O75844 475 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 KRT34O76011 436 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 IL1BP01584 269 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 PAMP19021 973 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 ALDH1A3P47895 512 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 GRIA4P48058 902 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 SLC11A2P49281 568 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 SLC12A2P55011 1212 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 SLC34A1Q06495 639 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 RING1Q06587 406 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 MSLNQ13421 630 aaPredicted RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 BTG3Q14201 252 aaPredicted RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 PARP15Q460N3 678 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 FOXB2Q5VYV0 432 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 TXNDC8Q6A555 127 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 LRRC49Q8IUZ0 686 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 TSNARE1Q96NA8 513 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 WDR55Q9H6Y2 383 aaPredicted RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 ATP13A1Q9HD20 1204 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 AGO1Q9UL18 857 aaKnown RBP12.5□□□□□ -0.41
RNF4-201ENST00000314289 PCDHGC4Q9Y5F7 938 aa12.5□□□□□ -0.41
RNF4-201ENST00000314289 TRIM13O60858 407 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 ZCCHC18P0CG32 403 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 GJA1P17302 382 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 IDH3AP50213 366 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 ZXDBP98169 803 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 SLC12A1Q13621 1099 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 SLC9B1Q4ZJI4 515 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 CMPK2Q5EBM0 449 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 FSCBQ5H9T9 825 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 TMCO4Q5TGY1 634 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 OTOP2Q7RTS6 562 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 C2CD4AQ8NCU7 369 aaPredicted RBP12.49□□□□□ -0.41
RNF4-201ENST00000314289 NAT14Q8WUY8 206 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 COG4Q9H9E3 785 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 SZT2Q5T011 3432 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 TMEM233B4DJY2 109 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 MAP3K7O43318 606 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 CDK18Q07002 472 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms