RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SLC38A2Q96QD8 506 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 DDX4Q9NQI0 724 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 PNPOQ9NVS9 261 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 FBXO5Q9UKT4 447 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ZNF232Q9UNY5 417 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 UGT2B11O75310 529 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 CDKN2BP42772 138 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 CDK9P50750 372 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 OLFML1Q6UWY5 402 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 HPS6Q86YV9 775 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ITCHQ96J02 903 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 KREMEN1Q96MU8 473 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 NPAS2Q99743 824 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 RPTORQ8N122 1335 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 PLK4O00444 970 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 TYMPP19971 482 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 TGFBR2P37173 567 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 CD86P42081 329 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ACLYP53396 1101 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 NOMO1Q15155 1222 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 CRY1Q16526 586 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ECM1Q16610 540 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 NARS2Q96I59 477 aaKnown RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 PWWP2AQ96N64 755 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 CCDC162PA2VCL2 907 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 UBXN8O00124 270 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 PEX11AO75192 247 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 NFKB1P19838 968 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ATP12AP54707 1039 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 MTX3Q5HYI7 312 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 DRICH1Q6PGQ1 229 aaPredicted RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 ITIH5Q86UX2 942 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 SAMD4AQ9UPU9 718 aaKnown RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 STON1Q9Y6Q2 735 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 A0A0J9YYE9 177 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 AKAP5P24588 427 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 PRAMEF18Q5VWM3 479 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 MON1BQ7L1V2 547 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ANKS1BQ7Z6G8 1248 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 KCTD4Q8WVF5 259 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 EGFL7Q9UHF1 273 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 DOLKQ9UPQ8 538 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 LYPLA2O95372 231 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ITGB6P18564 788 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 EPHB3P54753 998 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 BICRALQ6AI39 1079 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ZNF614Q8N883 585 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 NELL1Q92832 810 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 NACC2Q96BF6 587 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 BBS4Q96RK4 519 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 SMPD3Q9NY59 655 aaPredicted RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 TIPRLO75663 272 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 NADKO95544 446 aaPredicted RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 DBTP11182 482 aaKnown RBP13.23□□□□□ -0.29
SNED1-201ENST00000310397 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 SLCO6A1Q86UG4 719 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 IZUMO1Q8IYV9 350 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 ZNF671Q8TAW3 534 aa13.23□□□□□ -0.29
SNED1-201ENST00000310397 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 WNT7AO00755 349 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 UPP2O95045 317 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 IGSF6O95976 241 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 PRKCQQ04759 706 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 BCL2L1Q07817 233 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 USP45Q70EL2 814 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 CIB1Q99828 191 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 RWDD3Q9Y3V2 267 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 CSNK2BP67870 215 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 BHLHB9Q6PI77 547 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 SALL4Q9UJQ4 1053 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 PACSIN3Q9UKS6 424 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 LOC110117498-PIK3R3F6TDL0 507 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 ENDOD1O94919 500 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 C2P06681 752 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 HNRNPLP14866 589 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNED1-201ENST00000310397 ABCG1P45844 678 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 PSEN1P49768 467 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 GALK1P51570 392 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 C6orf52Q5T4I8 152 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 VPS35Q96QK1 796 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 RNASEH1O60930 286 aaKnown RBP13.22□□□□□ -0.29
SNED1-201ENST00000310397 PTPN3P26045 913 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 ZC3H12AQ5D1E8 599 aaKnown RBP13.22□□□□□ -0.29
SNED1-201ENST00000310397 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 ANKRD49Q8WVL7 239 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 NLNQ9BYT8 704 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 COL5A2P05997 1499 aaPredicted RBP13.22□□□□□ -0.29
SNED1-201ENST00000310397 MAPK8P45983 427 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 PRDM8Q9NQV8 689 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms