RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 SLC13A1Q9BZW2 595 aa19.67■□□□□ 0.74
LIME1-201ENST00000309546 NRSN2Q9GZP1 204 aa19.67■□□□□ 0.74
LIME1-201ENST00000309546 USP29Q9HBJ7 922 aa19.67■□□□□ 0.74
LIME1-201ENST00000309546 IFNKQ9P0W0 207 aa19.67■□□□□ 0.74
LIME1-201ENST00000309546 ANAPC7Q9UJX3 599 aa19.67■□□□□ 0.74
LIME1-201ENST00000309546 PNMA8BQ9ULN7 279 aaPredicted RBP19.67■□□□□ 0.74
LIME1-201ENST00000309546 LRP4O75096 1905 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 CPED1A4D0V7 1026 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 MUSKO15146 869 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 OPA1O60313 960 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 RARAP10276 462 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 SSR1P43307 286 aaKnown RBP19.66■□□□□ 0.74
LIME1-201ENST00000309546 ADKP55263 362 aaKnown RBP19.66■□□□□ 0.74
LIME1-201ENST00000309546 PPARDQ03181 441 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 PIGHQ14442 188 aaPredicted RBP19.66■□□□□ 0.74
LIME1-201ENST00000309546 ZNF235Q14590 738 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 TCEA2Q15560 299 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 WSCD2Q2TBF2 565 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 BOLA3Q53S33 107 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 POLNQ7Z5Q5 900 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 LZTR1Q8N653 840 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 MAPK15Q8TD08 544 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 ABCG4Q9H172 646 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 ETNK2Q9NVF9 386 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 SEPT3Q9UH03 358 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 CAPN11Q9UMQ6 739 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 PCDHB1Q9Y5F3 818 aa19.66■□□□□ 0.74
LIME1-201ENST00000309546 A0A087X0T9 212 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 TOR1BO14657 336 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 GCATO75600 419 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 GP1BAP07359 652 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 ANXA6P08133 673 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 FAM228BP0C875 321 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 SLC10A7Q0GE19 358 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 RTP5Q14D33 572 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 TXNRD3NBQ6F5E7 133 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 GUSBP11Q6P575 273 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 EFL1Q7Z2Z2 1120 aaKnown RBP19.65■□□□□ 0.74
LIME1-201ENST00000309546 RD3Q7Z3Z2 195 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 PDZD3Q86UT5 571 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 HID1Q8IV36 788 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 CACTIN-AS1Q8N1I8 211 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 IQCDQ96DY2 449 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 CSPG4P5Q96PW8 444 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 DEPDC7Q96QD5 511 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 SCUBE2Q9NQ36 999 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 NCKIPSDQ9NZQ3 722 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 IP6K2Q9UHH9 426 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 SALL4Q9UJQ4 1053 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 DOLKQ9UPQ8 538 aa19.65■□□□□ 0.74
LIME1-201ENST00000309546 LUC7L2Q9Y383 392 aaKnown RBP19.65■□□□□ 0.74
LIME1-201ENST00000309546 DSPP15924 2871 aaKnown RBP19.64■□□□□ 0.73
LIME1-201ENST00000309546 LAMA5O15230 3695 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 TTC24A2A3L6 582 aaPredicted RBP19.64■□□□□ 0.73
LIME1-201ENST00000309546 TPP1O14773 563 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 TLX3O43711 291 aaPredicted RBP19.64■□□□□ 0.73
LIME1-201ENST00000309546 BRINP1O60477 761 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 GYPCP04921 128 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 ELFN1P0C7U0 828 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 HTR1BP28222 390 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 GJC1P36383 396 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 RENBPP51606 427 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 AP1S1P61966 158 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 NSUN2Q08J23 767 aaKnown RBP eCLIP19.64■□□□□ 0.73
LIME1-201ENST00000309546 RALGDSQ12967 914 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 KRT81Q14533 505 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 INPP5AQ14642 412 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 NFATC4Q14934 902 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 NR0B2Q15466 257 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 CRTC1Q6UUV9 634 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 ENPP7Q6UWV6 458 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 ATPAF2Q8N5M1 289 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 GLMNQ92990 594 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 ECHDC3Q96DC8 303 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 PSKH2Q96QS6 385 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 PCDH18Q9HCL0 1135 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 OR1A2Q9Y585 309 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 CELSR3Q9NYQ7 3312 aa19.64■□□□□ 0.73
LIME1-201ENST00000309546 A8MX80 341 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 CELA2BP08218 269 aaPredicted RBP19.63■□□□□ 0.73
LIME1-201ENST00000309546 TSHRP16473 764 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 PEX5P50542 639 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 BLKP51451 505 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 CDH6P55285 790 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 SLC25A11Q02978 314 aaKnown RBP19.63■□□□□ 0.73
LIME1-201ENST00000309546 CCDC122Q5T0U0 273 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 C6orf132Q5T0Z8 1188 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 CDCP2Q5VXM1 449 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 ALKBH5Q6P6C2 394 aaKnown RBP19.63■□□□□ 0.73
LIME1-201ENST00000309546 NIPA2Q8N8Q9 360 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 PDCD6IPQ8WUM4 868 aaKnown RBP19.63■□□□□ 0.73
LIME1-201ENST00000309546 TEKT4Q8WW24 435 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 TSACCQ96A04 125 aaPredicted RBP19.63■□□□□ 0.73
LIME1-201ENST00000309546 NSMCE3Q96MG7 304 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 ZNF599Q96NL3 588 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 APOOQ9BUR5 198 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 CLPBQ9H078 707 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 ZFYVE26Q68DK2 2539 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 ASXL3Q9C0F0 2248 aa19.63■□□□□ 0.73
LIME1-201ENST00000309546 A0A087WV48 116 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms