RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TBATAQ96M53 351 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 C20orf27Q9GZN8 174 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 DNMT3BQ9UBC3 853 aaKnown RBP21.39■■□□□ 1.01
ATG4D-201ENST00000309469 VPS51Q9UID3 782 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 ACOT9Q9Y305 439 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 RAI2Q9Y5P3 530 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 MIA3Q5JRA6 1907 aa21.39■■□□□ 1.01
ATG4D-201ENST00000309469 DNAJC8O75937 253 aaPredicted RBP21.38■■□□□ 1.01
ATG4D-201ENST00000309469 PRLP01236 227 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 COL6A2P12110 1019 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 ARFIP2P53365 341 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 PGGT1BP53609 377 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 MPP7Q5T2T1 576 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 CRLF3Q8IUI8 442 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 CILP2Q8IUL8 1156 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 CEP97Q8IW35 865 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 GPATCH11Q8N954 259 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 DCAF4L2Q8NA75 395 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 RMDN1Q96DB5 314 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 TSNARE1Q96NA8 513 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 C17orf80Q9BSJ5 609 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 LHX3Q9UBR4 397 aa21.38■■□□□ 1.01
ATG4D-201ENST00000309469 LINC01553A4QN01 128 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 BUD23O43709 281 aaKnown RBP21.37■■□□□ 1.01
ATG4D-201ENST00000309469 SERPINE1P05121 402 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 TAS2R39P59534 338 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 POU4F1Q01851 419 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 ZNF789Q5FWF6 425 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 RTL10Q7L3V2 364 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 STYXQ8WUJ0 223 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 DNAJC1Q96KC8 554 aaKnown RBP21.37■■□□□ 1.01
ATG4D-201ENST00000309469 SMG9Q9H0W8 520 aaKnown RBP21.37■■□□□ 1.01
ATG4D-201ENST00000309469 MYLK2Q9H1R3 596 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 TASP1Q9H6P5 420 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 ARHGAP26Q9UNA1 814 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 RWDD3Q9Y3V2 267 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 PCDHGC4Q9Y5F7 938 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 SPO11Q9Y5K1 396 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 G3V2L1 256 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 RFPL2O75678 378 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 RPP40O75818 363 aaKnown RBP21.37■■□□□ 1.01
ATG4D-201ENST00000309469 CRTAMO95727 393 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 APOA4P06727 396 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 PDHA1P08559 390 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 RALBP11234 206 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 SYN1P17600 705 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 GRK2P25098 689 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 CLCN5P51795 746 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 EPHA5P54756 1037 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 UBE3AQ05086 875 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 PTPRCAPQ14761 206 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 NCEH1Q6PIU2 408 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 CCDC91Q7Z6B0 441 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 APCDD1Q8J025 514 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 OR13C4Q8NGS5 318 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 SHKBP1Q8TBC3 707 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 ERP27Q96DN0 273 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 OMDQ99983 421 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 TMEM120AQ9BXJ8 343 aa21.37■■□□□ 1.01
ATG4D-201ENST00000309469 SUDS3Q9H7L9 328 aaPredicted RBP21.37■■□□□ 1.01
ATG4D-201ENST00000309469 RUVBL2Q9Y230 463 aaKnown RBP21.37■■□□□ 1.01
ATG4D-201ENST00000309469 OR51F1A6NGY5 319 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 FGF19O95750 216 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 PTPN2P17706 415 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 SLC1A6P48664 564 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 SLC12A2P55011 1212 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 RHOAP61586 193 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 GPR158Q5T848 1215 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 TPGS1Q6ZTW0 290 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 ARID3BQ8IVW6 561 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-201ENST00000309469 KCTD4Q8WVF5 259 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 C2orf49Q9BVC5 232 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-201ENST00000309469 MAN1C1Q9NR34 630 aa21.36■■□□□ 1.01
ATG4D-201ENST00000309469 MARCH4Q9P2E8 410 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-201ENST00000309469 FCF1Q9Y324 198 aaKnown RBP21.36■■□□□ 1.01
ATG4D-201ENST00000309469 CCDC162PA2VCL2 907 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 ITM2AO43736 263 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 GLP2RO95838 553 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 S1PR4O95977 384 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 GOT2P00505 430 aaKnown RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 ZNF460Q14592 562 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 TTC31Q49AM3 519 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 RBM20Q5T481 1227 aaKnown RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 CENPLQ8N0S6 344 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 LPCAT1Q8NF37 534 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 SH3RF2Q8TEC5 729 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 TCEAL4Q96EI5 215 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 ADGRE3Q9BY15 652 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 ECT2Q9H8V3 914 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 PLK2Q9NYY3 685 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 MID2Q9UJV3 735 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 CLEC4EQ9ULY5 219 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 A0A087X1B8 175 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 MT-CO1P00395 513 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 MYL2P10916 166 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 TRAF2Q12933 501 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 ITGA9Q13797 1035 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 TAF1AQ15573 450 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-201ENST00000309469 RETSATQ6NUM9 610 aa21.35■■□□□ 1.01
ATG4D-201ENST00000309469 SPRED2Q7Z698 418 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms