RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 PCCBP05166 539 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 C1SP09871 688 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 HNF1BP35680 557 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 MMP12P39900 470 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 MAXP61244 160 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 AP1S1P61966 158 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 PTK2BQ14289 1009 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 TCEA2Q15560 299 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 HES3Q5TGS1 186 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 BBS5Q8N3I7 341 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 KCTD6Q8NC69 237 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 CHP1Q99653 195 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 SCUBE2Q9NQ36 999 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 SPTLC3Q9NUV7 552 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 UVRAGQ9P2Y5 699 aa17.16■□□□□ 0.34
HMGCLL1-202ENST00000308161 DMXL2Q8TDJ6 3036 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 TRABD2BA6NFA1 517 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 SRRM3A6NNA2 597 aaPredicted RBP17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 MFSD11O43934 449 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 MAFKO60675 156 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 MFAP3LO75121 409 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 TAS2R40P59535 323 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 NSUN2Q08J23 767 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 EIF2B5Q13144 721 aaKnown RBP17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 C1orf61Q13536 156 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 DPYSL3Q14195 570 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 MESDQ14696 234 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 WSCD2Q2TBF2 565 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 DEFB133Q30KQ1 61 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 FAXCQ5TGI0 409 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 TMPRSS12Q86WS5 348 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 PGBD5Q8N414 524 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 NSMCE3Q96MG7 304 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 TCEAL2Q9H3H9 227 aaPredicted RBP17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 NLGN3Q9NZ94 848 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 APOBEC3BQ9UH17 382 aaKnown RBP17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 PCDHGC4Q9Y5F7 938 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 CFAP47Q6ZTR5 3102 aa17.15■□□□□ 0.34
HMGCLL1-202ENST00000308161 ANKRD36A6QL64 1941 aa17.14■□□□□ 0.34
HMGCLL1-202ENST00000308161 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 K7ESM1 405 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 SCAMP1O15126 338 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 AQP9O43315 295 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 PEX11BO96011 259 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 ELFN1P0C7U0 828 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 GIMD1P0DJR0 217 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 IL4RP24394 825 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 ACP1P24666 158 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 HSPA9P38646 679 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 MMP13P45452 471 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 YPEL5P62699 121 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 POLR2LP62875 67 aaKnown RBP17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 ITKQ08881 620 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 ASTE1Q2TB18 679 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 PRRT3Q5FWE3 981 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 MARC1Q5VT66 337 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 RD3Q7Z3Z2 195 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 PHACTR4Q8IZ21 702 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 ECHDC3Q96DC8 303 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 NHEJ1Q9H9Q4 299 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 NT5MQ9NPB1 228 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 RCOR3Q9P2K3 495 aaPredicted RBP17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 SPASTQ9UBP0 616 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 TTLL3Q9Y4R7 772 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 OR1A2Q9Y585 309 aa17.14■□□□□ 0.33
HMGCLL1-202ENST00000308161 CPP00450 1065 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 KRT7P08729 469 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 TMEM253P0C7T8 217 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 CDK4P11802 303 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 CYP4F3Q08477 520 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 RALGDSQ12967 914 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 ILKQ13418 452 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 INPP5AQ14642 412 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 ACOX1Q15067 660 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 ANKRD20A8PQ5CZ79 823 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 DENND2CQ68D51 928 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 NCBP2-AS2Q69YL0 99 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 MACC1Q6ZN28 852 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 PROSER1Q86XN7 944 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 HID1Q8IV36 788 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 PCDH19Q8TAB3 1148 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 LRRN4Q8WUT4 740 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 BTN2A2Q8WVV5 523 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 NUDCD1Q96RS6 583 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 IL12RB2Q99665 862 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 DUSP23Q9BVJ7 150 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 SLC13A1Q9BZW2 595 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 SHROOM3Q8TF72 1996 aa17.13■□□□□ 0.33
HMGCLL1-202ENST00000308161 TAF4O00268 1085 aa17.12■□□□□ 0.33
HMGCLL1-202ENST00000308161 TRAFD1O14545 582 aaPredicted RBP17.12■□□□□ 0.33
HMGCLL1-202ENST00000308161 RECQL5O94762 991 aaPredicted RBP17.12■□□□□ 0.33
HMGCLL1-202ENST00000308161 ARSEP51690 589 aa17.12■□□□□ 0.33
HMGCLL1-202ENST00000308161 PPARDQ03181 441 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms