RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GRIK4Q16099 956 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 AARS2Q5JTZ9 985 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 RASIP1Q5U651 963 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 ALG1LQ6GMV1 187 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 RWDD4Q6NW29 188 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 CES3Q6UWW8 571 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 DET1Q7L5Y6 550 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 GPR155Q7Z3F1 870 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 LRRC49Q8IUZ0 686 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 HERC6Q8IVU3 1022 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 ARHGAP12Q8IWW6 846 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SCUBE3Q8IX30 993 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 FSTL5Q8N475 847 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 COLGALT1Q8NBJ5 622 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 PJA1Q8NG27 643 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 DDI1Q8WTU0 396 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 L3HYPDHQ96EM0 354 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CNBD2Q96M20 576 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 NSMCE3Q96MG7 304 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 ZNF560Q96MR9 790 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 AGAP3Q96P47 875 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 MBOAT4Q96T53 435 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 KCNK16Q96T55 309 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 IL12RB2Q99665 862 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 YIPF2Q9BWQ6 316 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 MRPL1Q9BYD6 325 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 IKZF3Q9UKT9 509 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 AP4E1Q9UPM8 1137 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 APOBEC2Q9Y235 224 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 I3L4J1 428 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 MMP2P08253 660 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 MTHFD2P13995 350 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SUOXP51687 545 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CLCN3P51790 818 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 C5orf22Q49AR2 442 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 ZNF789Q5FWF6 425 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CFAP157Q5JU67 520 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 FAM26DQ5JW98 314 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 ACBD5Q5T8D3 534 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 NOTUMQ6P988 496 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 SAMD1Q6SPF0 538 aaPredicted RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 GK5Q6ZS86 529 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 TRIM50Q86XT4 487 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 BEST2Q8NFU1 509 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 VOPP1Q96AW1 172 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 TEX37Q96LM6 180 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 LRGUKQ96M69 825 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 HEXIM2Q96MH2 286 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 OLFM1Q99784 485 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CEP41Q9BYV8 373 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 LRRC4Q9HBW1 653 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CNGB3Q9NQW8 809 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 CHST12Q9NRB3 414 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 VPS45Q9NRW7 570 aa5.49□□□□□ -1.53
VPS50-202ENST00000305866 OAS3Q9Y6K5 1087 aaKnown RBP5.49□□□□□ -1.53
VPS50-202ENST00000305866 FAM92AA1XBS5 289 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 SLCO1B7G3V0H7 640 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 RNF103O00237 685 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 ANKRD28O15084 1053 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 TRIM13O60858 407 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 CIB2O75838 187 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 PAPSS2O95340 614 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 SMPD1P17405 629 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 UGT1A6P19224 532 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 ME2P23368 584 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 SHMT2P34897 504 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 GZMMP51124 257 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 CRYBB1P53674 252 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 CBX3Q13185 183 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 CRY1Q16526 586 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 NKG7Q16617 165 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 ZNF829Q3KNS6 432 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 SV2CQ496J9 727 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 FBXO16Q8IX29 292 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 C2CD4AQ8NCU7 369 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 CCDC124Q96CT7 223 aaKnown RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 MAML3Q96JK9 1138 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 MARK4Q96L34 752 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 CALN1Q9BXU9 219 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 MROQ9BYG7 248 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 CYP4F11Q9HBI6 524 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 PDGFCQ9NRA1 345 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 PIGVQ9NUD9 493 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 PPP1R1BQ9UD71 204 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 SLC8A2Q9UPR5 921 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 PLXNA2O75051 1894 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 SMIM28A0A1B0GU29 152 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 TTC36A6NLP5 189 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 M0QZQ0 153 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 PIK3R2O00459 728 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 GRAP2O75791 330 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 CABYRO75952 493 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 SEMG1P04279 462 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 ZNF865P0CJ78 1059 aaPredicted RBP5.48□□□□□ -1.53
VPS50-202ENST00000305866 CAPN3P20807 821 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 HSPA13P48723 471 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 ATP6V0D1P61421 351 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 ZNF280DQ6N043 979 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 IYDQ6PHW0 289 aa5.48□□□□□ -1.53
VPS50-202ENST00000305866 NCCRP1Q6ZVX7 275 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms