RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 C16orf46Q6P387 395 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 DEFB106AQ8N104 65 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 BSNDQ8WZ55 320 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SGCDQ92629 289 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 HPS1Q92902 700 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 FERD3LQ96RJ6 166 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 COPS4Q9BT78 406 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 FUT8Q9BYC5 575 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 MRPL9Q9BYD2 267 aaKnown RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TKTL2Q9H0I9 626 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ABCB9Q9NP78 766 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TMEM39AQ9NV64 488 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SPEF1Q9Y4P9 236 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 AK9Q5TCS8 1911 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 GAKO14976 1311 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SIN3BO75182 1162 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 USP12O75317 370 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ZBTB11O95625 1053 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 S100A2P29034 98 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC26A2P50443 739 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 MC1RQ01726 317 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TBX2Q13207 712 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF268Q14587 947 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CES5AQ6NT32 575 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 GALNT7Q86SF2 657 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 GPR180Q86V85 440 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC41A1Q8IVJ1 513 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CD101Q93033 1021 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 PPP1R14BQ96C90 147 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 NINJ2Q9NZG7 142 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TMEM5Q9Y2B1 443 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC27A6Q9Y2P4 619 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CNTNAP5Q8WYK1 1306 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 UBE2Q2LH0YL09 131 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC9A3R1O14745 358 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 MICAL2O94851 1124 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CYB5AP00167 134 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 FTH1P02794 183 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ALOX5P09917 674 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CYP4B1P13584 511 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CDH5P33151 784 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 PTENP60484 403 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 PSME3P61289 254 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 PDK3Q15120 406 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 POM121L1PQ3SYA9 428 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ZBTB46Q86UZ6 589 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 IDI2Q9BXS1 227 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 MROH8Q9H579 483 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 C3orf14Q9HBI5 128 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TSPOAP1O95153 1857 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TRDMT1O14717 391 aaKnown RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC37A4O43826 429 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 UGT2B17O75795 530 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CCNB2O95067 398 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 NADKO95544 446 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CES1P23141 567 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC6A2P23975 617 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CYP4F8P98187 520 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TNFAIP8L3Q5GJ75 292 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 OR4A15Q8NGL6 344 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 EXOC2Q96KP1 924 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 C2CD2Q9Y426 696 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 A0A075B6Q4 140 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SUV39H1O43463 412 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF286BP0CG31 522 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SLC7A2P52569 658 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 CDH4P55283 916 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 LAMTOR4Q0VGL1 99 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ZFP69Q49AA0 526 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 TAPT1Q6NXT6 567 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 KCNT2Q6UVM3 1135 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 MCOLN2Q8IZK6 566 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ZNF567Q8N184 647 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 SYTL5Q8TDW5 730 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-201ENST00000302528 ISCA1Q9BUE6 129 aa10.43□□□□□ -0.74
CLIP1-201ENST00000302528 NRKQ7Z2Y5 1582 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 DLC1Q96QB1 1528 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 LRIG2O94898 1065 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SLC35G4P0C7Q5 338 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 TSPAN5P62079 268 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 PCID2Q5JVF3 399 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SNAP47Q5SQN1 464 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ANXA8L1Q5VT79 327 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 CAVIN3Q969G5 261 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 WDR12Q9GZL7 423 aaKnown RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ABCG8Q9H221 673 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SETD4Q9NVD3 440 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 EXD2Q9NVH0 621 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ETAA1Q9NY74 926 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 QSOX1O00391 747 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SLC33A1O00400 549 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 CHST10O43529 356 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 MAGEC1O60732 1142 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 HCN1O60741 890 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 ADRA1DP25100 572 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SDC2P34741 201 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 BNIP2Q12982 314 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 GRB10Q13322 594 aa10.42□□□□□ -0.74
CLIP1-201ENST00000302528 CXorf57Q6NSI4 855 aaKnown RBP10.42□□□□□ -0.74
CLIP1-201ENST00000302528 SERPINA13PQ6UXR4 307 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms