RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 ZNF197O14709 1029 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 GRM6O15303 877 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 PLIN3O60664 434 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 TGDSO95455 350 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 BPGMP07738 259 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 RHOP08100 348 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 CSKP41240 450 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 CCR2P41597 374 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 MAPK8P45983 427 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 RGRP47804 291 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 CD151P48509 253 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 ERVK-21P61565 698 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 AP1S1P61966 158 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 IFT88Q13099 833 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 ZKSCAN8Q15776 578 aaPredicted RBP12.08□□□□□ -0.48
TPM3-202ENST00000302206 FSCBQ5H9T9 825 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 PRSS36Q5K4E3 855 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 ATG16L1Q676U5 607 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 CGB2Q6NT52 195 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 NCEH1Q6PIU2 408 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 CCDC91Q7Z6B0 441 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 OR13J1Q8NGT2 312 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 GPR150Q8NGU9 434 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 SH3RF2Q8TEC5 729 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 DDI1Q8WTU0 396 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 STYXQ8WUJ0 223 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 TDRD1Q9BXT4 1180 aaKnown RBP12.08□□□□□ -0.48
TPM3-202ENST00000302206 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 KDM4CQ9H3R0 1056 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.08□□□□□ -0.48
TPM3-202ENST00000302206 SLC2A6Q9UGQ3 507 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 VPS51Q9UID3 782 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 MID2Q9UJV3 735 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 FBXO5Q9UKT4 447 aa12.08□□□□□ -0.48
TPM3-202ENST00000302206 TRANK1O15050 2925 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 TTC24A2A3L6 582 aaPredicted RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 CCT8L1PA6NM43 557 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 SNAP91O60641 907 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 RPP40O75818 363 aaKnown RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 CRTAMO95727 393 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 AHSGP02765 367 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 PROCP04070 461 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 APOA4P06727 396 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 EPCAMP16422 314 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 GJA1P17302 382 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 HOXB8P17481 243 aaPredicted RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 GABRB3P28472 473 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 CRABP2P29373 138 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 WEE1P30291 646 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 AVPR1AP37288 418 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 LEPRP48357 1165 aaKnown RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 SCNN1BP51168 640 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 CLCN5P51795 746 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 RPL26P61254 145 aaKnown RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 GRM3Q14832 879 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 TEAD2Q15562 447 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 LACTB2Q53H82 288 aaPredicted RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 N4BP2L1Q5TBK1 243 aaPredicted RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 FAM47EQ6ZV65 393 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 OTOAQ7RTW8 1153 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 NUDCD3Q8IVD9 361 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 OTUB2Q96DC9 234 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 LMLNQ96KR4 655 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 C19orf43Q9BQ61 176 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 TSSK1BQ9BXA7 367 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 C12orf65Q9H3J6 166 aaKnown RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 CERS4Q9HA82 394 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 C11orf16Q9NQ32 467 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 HCFC1R1Q9NWW0 138 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.07□□□□□ -0.48
TPM3-202ENST00000302206 HACD3Q9P035 362 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 TBC1D14Q9P2M4 693 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 GGT7Q9UJ14 662 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 EMCNQ9ULC0 261 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 CORO1CQ9ULV4 474 aaPredicted RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 RPL26L1Q9UNX3 145 aaKnown RBP12.07□□□□□ -0.48
TPM3-202ENST00000302206 RAI2Q9Y5P3 530 aa12.07□□□□□ -0.48
TPM3-202ENST00000302206 A0A096LPK6 155 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 WDR91A4D1P6 747 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 NRG2O14511 850 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 RFPL2O75678 378 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 GJB3O75712 270 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 ARHGEF15O94989 841 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 GSRP00390 522 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 PENKP01210 267 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 PRLP01236 227 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 C2P06681 752 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 TROVE2P10155 538 aaKnown RBP eCLIP12.06□□□□□ -0.48
TPM3-202ENST00000302206 NEFHP12036 1026 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 POU3F3P20264 500 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 BGNP21810 368 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 IRS1P35568 1242 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 SLC1A2P43004 574 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 RHOAP61586 193 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms