RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PMM1Q92871 262 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SNX15Q9NRS6 342 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CMTM6Q9NX76 183 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 A8MUI8 341 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PEX10O60683 326 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CATP04040 527 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CCNYL3P0C7X3 344 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 WASP42768 502 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GPRIN3Q6ZVF9 776 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C12orf65Q9H3J6 166 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ATP13A3Q9H7F0 1226 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF446Q9NWS9 450 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 XPR1Q9UBH6 696 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DPP7Q9UHL4 492 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PTPN20Q4JDL3 420 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PLPP4Q5VZY2 271 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RERGQ96A58 199 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MCUBQ9NWR8 336 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GTPBP1O00178 669 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TLX1P31314 330 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DLG2Q15700 870 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TSC22D1Q15714 1073 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MEA1Q16626 185 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CATSPERGQ6ZRH7 1159 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OTOP3Q7RTS5 596 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 HPS6Q86YV9 775 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SPAG4Q9NPE6 437 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MORF4L1Q9UBU8 362 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NWD1Q149M9 1564 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SCN2BO60939 215 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC25A12O75746 678 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NOMO2Q5JPE7 1267 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NIPA1Q7RTP0 329 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 APLFQ8IW19 511 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C1QTNF7Q9BXJ2 289 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SAR1AQ9NR31 198 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MRPS23Q9Y3D9 190 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 A0A087WXM4 84 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AP3D1O14617 1153 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CXCL11O14625 94 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RXRGP48443 463 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 IQSEC1Q6DN90 963 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RPTNQ6XPR3 784 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LDB1Q86U70 411 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TMEM161BQ8NDZ6 487 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TSPAN14Q8NG11 270 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PHF10Q8WUB8 498 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PANX1Q96RD7 426 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TINF2Q9BSI4 451 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D10AQ9BXI6 508 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TRIM39Q9HCM9 518 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TMEM216Q9P0N5 145 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TNPO3Q9Y5L0 923 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 A0A1W2PQH9 124 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SGTAO43765 313 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PDE9AO76083 593 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 JAK1P23458 1154 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TREML2Q5T2D2 321 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RBM44Q6ZP01 1051 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAM98AQ8NCA5 519 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OR7A2PQ8NGA2 310 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C2orf49Q9BVC5 232 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NXF3Q9H4D5 531 aaKnown RBP13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CLIC5Q9NZA1 410 aa13.63□□□□□ -0.23
CHRFAM7A-201ENST00000299847 A0A088AWK7 358 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MEIS2O14770 477 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 WARSP23381 471 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PMF1Q6P1K2 205 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ARHGAP22Q7Z5H3 698 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FUKQ8N0W3 1084 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CCL16O15467 120 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PLOD3O60568 738 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ULK1O75385 1050 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PEX6Q13608 980 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MED22Q15528 200 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAAH2Q6GMR7 532 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NKAPQ8N5F7 415 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MCMBPQ9BTE3 642 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 hCG_1818297A0A087WSY0 165 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PSMD5Q16401 504 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 POC5Q8NA72 575 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ASB2Q96Q27 587 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 VAT1Q99536 393 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FNDC11Q9BVV2 318 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GSTK1Q9Y2Q3 226 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SF3B1O75533 1304 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NRP2O60462 931 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms