RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 GRB14Q14449 540 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 KBTBD6Q86V97 674 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 TMCO5AQ8N6Q1 288 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 CASP10Q92851 521 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 TRPC7Q9HCX4 862 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 TMLHEQ9NVH6 421 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 STK39Q9UEW8 545 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 FBXO5Q9UKT4 447 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 COPG1Q9Y678 874 aaKnown RBP13.54□□□□□ -0.24
CTDP1-202ENST00000299543 KANSL1LA0AUZ9 987 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 ARL5CA6NH57 179 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 F8W810 466 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 H3BNX3 289 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 APOA4P06727 396 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 PCSK1P29120 753 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 RALGDSQ12967 914 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 AGKQ53H12 422 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 RARS2Q5T160 578 aaKnown RBP13.54□□□□□ -0.24
CTDP1-202ENST00000299543 METTL21CQ5VZV1 264 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 Q6ZNX1 250 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 MFSD6LQ8IWD5 586 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 TXNDC5Q8NBS9 432 aaKnown RBP13.54□□□□□ -0.24
CTDP1-202ENST00000299543 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
CTDP1-202ENST00000299543 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 CAAP1Q9H8G2 361 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 GLOD4Q9HC38 313 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 NT5MQ9NPB1 228 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 PSMD13Q9UNM6 376 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 ME2P23368 584 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 MAGEA12P43365 314 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 CXCR3P49682 368 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 SLC5A3P53794 718 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
CTDP1-202ENST00000299543 PTK2BQ14289 1009 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 UGP2Q16851 508 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 NEPROQ6NW34 567 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 CXCL17Q6UXB2 119 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 RP9Q8TA86 221 aaKnown RBP13.54□□□□□ -0.24
CTDP1-202ENST00000299543 VAT1Q99536 393 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 SACM1LQ9NTJ5 587 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 RRN3Q9NYV6 651 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 NCKIPSDQ9NZQ3 722 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 CEPT1Q9Y6K0 416 aa13.54□□□□□ -0.24
CTDP1-202ENST00000299543 C9JVG2 144 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 ANXA9O76027 345 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 HLA-DQB2P05538 268 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 HMBSP08397 361 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
CTDP1-202ENST00000299543 DPP6P42658 865 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 CDH15P55291 814 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 PPP1R3AQ16821 1122 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 METTL23Q86XA0 190 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 LSMEM2Q8N112 164 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 BBS5Q8N3I7 341 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 PPWD1Q96BP3 646 aaKnown RBP13.53□□□□□ -0.24
CTDP1-202ENST00000299543 SPATA17Q96L03 361 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 CCT7Q99832 543 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 MRPL46Q9H2W6 279 aaKnown RBP13.53□□□□□ -0.24
CTDP1-202ENST00000299543 SLC38A7Q9NVC3 462 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 FNDC3AQ9Y2H6 1198 aaKnown RBP13.53□□□□□ -0.24
CTDP1-202ENST00000299543 CRYL1Q9Y2S2 319 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 BPTFQ12830 3046 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 J3QRK9 145 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 DNAJA2O60884 412 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 KCNA5P22460 613 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 LRPAP1P30533 357 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 CDH13P55290 713 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 PITRM1Q5JRX3 1037 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 STYXQ8WUJ0 223 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 FBXL8Q96CD0 374 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 C1QTNF1Q9BXJ1 281 aa13.53□□□□□ -0.24
CTDP1-202ENST00000299543 OR51F1A6NGY5 319 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 EIF3FO00303 357 aaPredicted RBP13.52□□□□□ -0.24
CTDP1-202ENST00000299543 SUPT7LO94864 414 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 ALDH2P05091 517 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 CDKL1Q00532 357 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 LPCAT2Q7L5N7 544 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.24
CTDP1-202ENST00000299543 ATP6V1E2Q96A05 226 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 PKP2Q99959 881 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 KIAA1522Q9P206 1035 aaPredicted RBP13.52□□□□□ -0.24
CTDP1-202ENST00000299543 CDH9Q9ULB4 789 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 MTF2Q9Y483 593 aaPredicted RBP13.52□□□□□ -0.24
CTDP1-202ENST00000299543 SPO11Q9Y5K1 396 aa13.52□□□□□ -0.24
CTDP1-202ENST00000299543 FUOMA2VDF0 154 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 K7EPI3 171 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 H2AFYO75367 372 aaKnown RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 OCM2P0CE71 109 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 OCMP0CE72 109 aaPredicted RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 SCAPQ12770 1279 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 XKR5Q6UX68 686 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms