RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SLC35F5Q8WV83 523 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 GPR22Q99680 433 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 FICDQ9BVA6 458 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 DDIT4Q9NX09 232 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 PTBP2Q9UKA9 531 aaKnown RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 MT-CYBP00156 380 aaPredicted RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CYP2C8P10632 490 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ALDH4A1P30038 563 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CAPGP40121 348 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 RABGGTBP53611 331 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CTBSQ01459 385 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 FBXO48Q5FWF7 155 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 NIPAL1Q6NVV3 410 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 METTL7BQ6UX53 244 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ADCK1Q86TW2 530 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 SLC7A5P1Q8MH63 180 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ZCCHC7Q8N3Z6 543 aaKnown RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 GIN1Q9NXP7 522 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 TUBA8Q9NY65 449 aaPredicted RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 IPO11Q9UI26 975 aaKnown RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 BTRCQ9Y297 605 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CORINQ9Y5Q5 1042 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 GFAPP14136 432 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 MATKP42679 507 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 BAG6P46379 1132 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ACADVLP49748 655 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 DNASE1L3Q13609 305 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 LRP8Q14114 963 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 BROXQ5VW32 411 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ANKRD26P1Q6NSI1 321 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CCDC81Q6ZN84 652 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ZDHHC17Q8IUH5 632 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 KIAA2013Q8IYS2 634 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CMTR2Q8IYT2 770 aaKnown RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ANKRD13AQ8IZ07 590 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 CENPLQ8N0S6 344 aaPredicted RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 COPS5Q92905 334 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 GLMNQ92990 594 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ZNHIT2Q9UHR6 403 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 ANAPC2Q9UJX6 822 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 SNX10Q9Y5X0 201 aa11.47□□□□□ -0.57
TRUB1-201ENST00000298746 DOCK5Q9H7D0 1870 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 TCRBV3S1A0A5B6 114 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 RSL1D1O76021 490 aaKnown RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 IPO13O94829 963 aaKnown RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 PGK1P00558 417 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 PGK2P07205 417 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 ARF4P18085 180 aaPredicted RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 PROZP22891 400 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 OXTRP30559 389 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 TARBP2Q15633 366 aaKnown RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 ARL13BQ3SXY8 428 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 CRTC3Q6UUV7 619 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 RAB44Q7Z6P3 723 aaPredicted RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 CLEC14AQ86T13 490 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 TOP1MTQ969P6 601 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 GJD4Q96KN9 370 aaPredicted RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.57
TRUB1-201ENST00000298746 HERC2P3Q9BVR0 1158 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 HMG20AQ9NP66 347 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 MID1IP1Q9NPA3 183 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 MRGBPQ9NV56 204 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 KLK14Q9P0G3 267 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 SUN2Q9UH99 717 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 VPS51Q9UID3 782 aa11.46□□□□□ -0.57
TRUB1-201ENST00000298746 CLDN5O00501 218 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.58
TRUB1-201ENST00000298746 CPB1P15086 417 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 MYF6P23409 242 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 GLUD2P49448 558 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 NDUFV1P49821 464 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 PIGFQ07326 219 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 MIER2Q8N344 545 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 ANKFN1Q8N957 763 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF420Q8TAQ5 688 aaPredicted RBP11.46□□□□□ -0.58
TRUB1-201ENST00000298746 MUC3BQ9H195 1237 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 FZD8Q9H461 694 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 NOL6Q9H6R4 1146 aaKnown RBP11.46□□□□□ -0.58
TRUB1-201ENST00000298746 MYOZ2Q9NPC6 264 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 FBXO5Q9UKT4 447 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 FZD10Q9ULW2 581 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 PTGDR2Q9Y5Y4 395 aa11.46□□□□□ -0.58
TRUB1-201ENST00000298746 C16orf96A6NNT2 1141 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 H3BMM5 538 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 PARNO95453 639 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 BMP2P12643 396 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 LMO2P25791 158 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 KCNK10P57789 538 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 MTA1Q13330 715 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 DGCR6Q14129 220 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms