RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 TMA7Q9Y2S6 64 aaKnown RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 AP4B1Q9Y6B7 739 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 COMMD3-BMI1R4GMX3 469 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 SCAMP3O14828 347 aaKnown RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 CST1P01037 141 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 ITGA2P17301 1181 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 UGCGQ16739 394 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 FAM81AQ8TBF8 368 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 CLN6Q9NWW5 311 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 TBC1D30Q9Y2I9 924 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 TRAFD1O14545 582 aaPredicted RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 TSPAN9O75954 239 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 IDO1P14902 403 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 ZNF37AP17032 561 aaPredicted RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 RPL3P39023 403 aaKnown RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 SLC7A2P52569 658 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 CDH13P55290 713 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 MRPS6P82932 125 aaKnown RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 SWT1Q5T5J6 900 aaKnown RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 DEPDC4Q8N2C3 294 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 ZFP28Q8NHY6 868 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 COL26A1Q96A83 441 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 PPP1R16AQ96I34 528 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 TRMOQ9BU70 441 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 RHOJQ9H4E5 214 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 CRNNQ9UBG3 495 aaPredicted RBP16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 ANGPT4Q9Y264 503 aa16.88■□□□□ 0.29
CNTNAP3-201ENST00000297668 TNFRSF21O75509 655 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 EPORP19235 508 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 COPZ1P61923 177 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 BIKQ13323 160 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 HIPK1Q86Z02 1210 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 DENND1CQ8IV53 801 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 CAMKK1Q8N5S9 505 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 ASZ1Q8WWH4 475 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 MYDGFQ969H8 173 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 FAM84AQ96KN4 292 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 KLHL31Q9H511 634 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 PCDH12Q9NPG4 1184 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 NCKAP1Q9Y2A7 1128 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 FGF1P05230 155 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 WARSP23381 471 aaKnown RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 PAX3P23760 479 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 GRM5P41594 1212 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 FOLH1Q04609 750 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 FUT2Q10981 343 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 NOMO1Q15155 1222 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 CPSF6Q16630 551 aaKnown RBP eCLIP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 PHF10Q8WUB8 498 aaKnown RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 EXOC2Q96KP1 924 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 Q96MT0 163 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 LHX5Q9H2C1 402 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 ZNHIT2Q9UHR6 403 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 EFR3BQ9Y2G0 817 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 ENO2P09104 434 aaPredicted RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 TLX1P31314 330 aaPredicted RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 LSM3P62310 102 aaKnown RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 PTPN20Q4JDL3 420 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 C17orf50Q8WW18 174 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 FAIM2Q9BWQ8 316 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 DUSP16Q9BY84 665 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 MRPL17Q9NRX2 175 aaKnown RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 CORO2BQ9UQ03 480 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 IRF6O14896 467 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 LINC00032P0C843 101 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 QPCTQ16769 361 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 KCTD19Q17RG1 926 aaPredicted RBP16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 SH3BP5LQ7L8J4 393 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 GSTCDQ8NEC7 633 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 OR4L1Q8NH43 312 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 PPP1R13LQ8WUF5 828 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 NELL1Q92832 810 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 TMEM165Q9HC07 324 aa16.87■□□□□ 0.29
CNTNAP3-201ENST00000297668 TBC1D3BA6NDS4 549 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 QSOX1O00391 747 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 CLDN5O00501 218 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 CSH1P0DML2 217 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 CSH2P0DML3 217 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 NDUFA5Q16718 116 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 KBTBD8Q8NFY9 601 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 PANX1Q96RD7 426 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 SPATA5L1Q9BVQ7 753 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 RHBGQ9H310 441 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 SLC9A3R1O14745 358 aaPredicted RBP16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 MAGEC1O60732 1142 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 C2P06681 752 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 MZT2BQ6NZ67 158 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 FAM35AQ86V20 835 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 TMEM139Q8IV31 216 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 PLEKHG4BQ96PX9 1271 aa16.86■□□□□ 0.29
CNTNAP3-201ENST00000297668 EGFL7Q9UHF1 273 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms