RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FRG1Q14331 258 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 CBX2Q14781 532 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 OR10G6Q8NH81 332 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 LRRN4Q8WUT4 740 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 TFAP2BQ92481 460 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 APOBEC3GQ9HC16 384 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 VWA7Q9Y334 891 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 PCDHB1Q9Y5F3 818 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 COL1A1P02452 1464 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 MRASO14807 208 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 MFSD11O43934 449 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ASLP04424 464 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 CNPP09543 421 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 POU1F1P28069 291 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 CTBP1Q13363 440 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 NETO2Q8NC67 525 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 PRKAG3Q9UGI9 489 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 SNX13Q9Y5W8 968 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 AHDC1Q5TGY3 1603 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 RPP40O75818 363 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCNDBP1O95273 360 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ATP6V1B2P21281 511 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 RTL3Q8N8U3 475 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF75CPQ92670 426 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 FANCEQ9HB96 536 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 UQCRBP14927 111 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SPAM1P38567 509 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 RXRGP48443 463 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 RAD23AP54725 363 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 CYP4F8P98187 520 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 UBXN2BQ14CS0 331 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SOWAHAQ2M3V2 549 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZCCHC23Q6ZST2 131 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 PIWIL4Q7Z3Z4 852 aaKnown RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 OR7D4Q8NG98 312 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 TRPC4APQ8TEL6 797 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ALG3Q92685 438 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ART4Q93070 314 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 MTFMTQ96DP5 389 aaKnown RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 INTS7Q9NVH2 962 aaKnown RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 WRAP73Q9P2S5 460 aaPredicted RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SLC12A4Q9UP95 1085 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 OTCP00480 354 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 PBX1P40424 430 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SIAH1Q8IUQ4 282 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 PLD5Q8N7P1 536 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ADPRHL2Q9NX46 363 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SNUPNO95149 360 aaKnown RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ITGA2BP08514 1039 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 XKR6Q5GH73 641 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 LDLRAD1Q5T700 205 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 LINGO4Q6UY18 593 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 PLD3Q8IV08 490 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 DAW1Q8N136 415 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 OR4K2Q8NGD2 314 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 PTCD2Q8WV60 388 aaKnown RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 AP2M1Q96CW1 435 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 PPP3R2Q96LZ3 170 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM83DQ9H4H8 585 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SERPINI2O75830 405 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 FSHRP23945 695 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 GBE1Q04446 702 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM98BQ52LJ0 330 aaKnown RBP17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF544Q6NX49 715 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 KRT73Q86Y46 540 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 SLC25A51Q9H1U9 297 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ACSS3Q9H6R3 686 aa17.78■□□□□ 0.44
CDC42EP3-201ENST00000295324 ATG13O75143 517 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 GPR135Q8IZ08 494 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 COL26A1Q96A83 441 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 LINGO1Q96FE5 620 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 CXCR3P49682 368 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 TEAD4Q15561 434 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 AP5B1Q2VPB7 878 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 KHDRBS2Q5VWX1 349 aaKnown RBP17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 DNAJC14Q6Y2X3 702 aaPredicted RBP17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 ATG16L2Q8NAA4 619 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 SH3RF2Q8TEC5 729 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 A0A1W2PRU2 124 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 EPN2O95208 641 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 SH3GL3Q99963 347 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 CNTN3Q9P232 1028 aa17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 MRPS33Q9Y291 106 aaKnown RBP17.77■□□□□ 0.44
CDC42EP3-201ENST00000295324 ENO2P09104 434 aaPredicted RBP17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 TPSB2P20231 275 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 DDX6P26196 483 aaKnown RBP eCLIP17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 IL10RBQ08334 325 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 ILF3Q12906 894 aaKnown RBP eCLIP17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 TPSAB1Q15661 275 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 BHLHB9Q6PI77 547 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 FIG4Q92562 907 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 ACTL7BQ9Y614 415 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 C2CD4BA6NLJ0 364 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 PMM2O15305 246 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 KIF1CO43896 1103 aaKnown RBP17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 AVILO75366 819 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 VIPP01282 170 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 ASPAP45381 313 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms