RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 OAZ3Q9UMX2 235 aa14.8□□□□□ -0.04
CCNF-201ENST00000293968 COL11A1P12107 1806 aaPredicted RBP14.79□□□□□ -0.04
CCNF-201ENST00000293968 A0A0J9YYE9 177 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 PLIN5Q00G26 463 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 LRP8Q14114 963 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 COLEC11Q9BWP8 271 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 RHOBTB2Q9BYZ6 727 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 GJD2Q9UKL4 321 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 NPHS1O60500 1241 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 BAIAP3O94812 1187 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 HMOX2P30519 316 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 BNIP3Q12983 259 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 SV2CQ496J9 727 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 CLEC20AQ6ZU45 233 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 MOB2Q70IA6 237 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 FAR2Q96K12 515 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 ADNPQ9H2P0 1102 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 ZNF385DQ9H6B1 395 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 MTF2Q9Y483 593 aaPredicted RBP14.79□□□□□ -0.04
CCNF-201ENST00000293968 PHIPQ8WWQ0 1821 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 C8BP07358 591 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 CES1P23141 567 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 C21orf59P57076 290 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 FRG1Q14331 258 aaKnown RBP14.79□□□□□ -0.04
CCNF-201ENST00000293968 BTBD8Q5XKL5 378 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 ERO1BQ86YB8 467 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 DDHD1Q8NEL9 900 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 MID1IP1Q9NPA3 183 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 WARS2Q9UGM6 360 aaKnown RBP14.79□□□□□ -0.04
CCNF-201ENST00000293968 PAIP2BQ9ULR5 123 aaKnown RBP14.79□□□□□ -0.04
CCNF-201ENST00000293968 SCN1AP35498 2009 aa14.79□□□□□ -0.04
CCNF-201ENST00000293968 I6L893 689 aaPredicted RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 J3QRK9 145 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 COL6A2P12110 1019 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 CXCR3P49682 368 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 SOX4Q06945 474 aaPredicted RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 KCTD11Q693B1 232 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 OGFOD2Q6N063 350 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 FBXL8Q96CD0 374 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 ING2Q9H160 280 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 SH3GLB1Q9Y371 365 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 CROCCQ5TZA2 2017 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 EI24O14681 340 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 USP2O75604 605 aaPredicted RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 ZBTB7AO95365 584 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 GPRIN1Q7Z2K8 1008 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 CROCCP3Q8IVE0 287 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 MTG1Q9BT17 334 aaPredicted RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 KIFC1Q9BW19 673 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 CNOT11Q9UKZ1 510 aaKnown RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 NUP205Q92621 2012 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 A0A087X1B8 175 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 ANXA9O76027 345 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 LTA4HP09960 611 aaKnown RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 OCM2P0CE71 109 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 OCMP0CE72 109 aaPredicted RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 ARHGAP1Q07960 439 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 MERTKQ12866 999 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
CCNF-201ENST00000293968 SMYD1Q8NB12 490 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 TNIP2Q8NFZ5 429 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 FBXW11Q9UKB1 542 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 FADS3Q9Y5Q0 445 aa14.78□□□□□ -0.04
CCNF-201ENST00000293968 C1orf232A0A0U1RR37 186 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 HSPA1AP0DMV8 641 aaKnown RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 HSPA1BP0DMV9 641 aaKnown RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 GFAPP14136 432 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 IGFBP6P24592 240 aaPredicted RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 MAXP61244 160 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 PAN2Q504Q3 1202 aaKnown RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 HM13Q8TCT9 377 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 C19orf60Q96EN9 201 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 OLFM1Q99784 485 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 NAA50Q9GZZ1 169 aaKnown RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 PFDN4Q9NQP4 134 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 SELENONQ9NZV5 590 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 FNDC3AQ9Y2H6 1198 aaKnown RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 ATE1O95260 518 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 SLC25A27O95847 323 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 LINC00032P0C843 101 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 NR4A1P22736 598 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 HOXA11P31270 313 aaPredicted RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 ALDH3B2P48448 385 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 ZBED5Q49AG3 693 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 LDLRAP1Q5SW96 308 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 SCIMPQ6UWF3 145 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 ERMP1Q7Z2K6 904 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 RBM12BQ8IXT5 1001 aaKnown RBP14.77□□□□□ -0.04
CCNF-201ENST00000293968 NAT16Q8N8M0 369 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 VAT1Q99536 393 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 ARMC7Q9H6L4 198 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 PKD2L2Q9NZM6 624 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 NDUFAF1Q9Y375 327 aa14.77□□□□□ -0.04
CCNF-201ENST00000293968 RGPD3A6NKT7 1758 aaPredicted RBP14.77□□□□□ -0.05
CCNF-201ENST00000293968 RGPD4Q7Z3J3 1758 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 NFKBIEO00221 500 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 SIX3O95343 332 aaPredicted RBP14.77□□□□□ -0.05
CCNF-201ENST00000293968 ZBTB11O95625 1053 aaPredicted RBP14.77□□□□□ -0.05
CCNF-201ENST00000293968 CACNB2Q08289 660 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms