RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 LINC00523Q86TU6 105 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 FBXL6Q8N531 539 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 RPLP0P6Q8NHW5 317 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 PDCD6IPQ8WUM4 868 aaKnown RBP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 OR8D1Q8WZ84 308 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 SERPINB12Q96P63 405 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 FAM129BQ96TA1 746 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 NELL2Q99435 816 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 OSBPL6Q9BZF3 934 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 LMAN1LQ9HAT1 526 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 CASS4Q9NQ75 786 aa17.92■□□□□ 0.46
CCDC78-201ENST00000293889 ARIH1Q9Y4X5 557 aaPredicted RBP17.92■□□□□ 0.46
CCDC78-201ENST00000293889 HTRA2O43464 458 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-201ENST00000293889 LEFTY1O75610 366 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 UGT2B4P06133 528 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 ATXN1LP0C7T5 689 aaKnown RBP17.91■□□□□ 0.46
CCDC78-201ENST00000293889 CAMK2GQ13555 558 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-201ENST00000293889 SLC1A5Q15758 541 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 SIRPB2Q5JXA9 342 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 SPDYCQ5MJ68 293 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 LRRC8BQ6P9F7 803 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 SLC25A41Q8N5S1 370 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 ZNF641Q96N77 438 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-201ENST00000293889 FMO2Q99518 471 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 C1QTNF1Q9BXJ1 281 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 FAM107BQ9H098 131 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 SUV39H2Q9H5I1 410 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 XAB2Q9HCS7 855 aaKnown RBP17.91■□□□□ 0.46
CCDC78-201ENST00000293889 DLGAP2Q9P1A6 1054 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 MTRF1LQ9UGC7 380 aaKnown RBP17.91■□□□□ 0.46
CCDC78-201ENST00000293889 PCDHB9Q9Y5E1 797 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 ANKRD36A6QL64 1941 aa17.91■□□□□ 0.46
CCDC78-201ENST00000293889 PRR33A8MZF0 331 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ALOX15BO15296 676 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 FZD6O60353 706 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 SYNCRIPO60506 623 aaKnown RBP17.9■□□□□ 0.46
CCDC78-201ENST00000293889 PGLSO95336 258 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 NDST3O95803 873 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 MLNP12872 115 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 HOXB2P14652 356 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 CA4P22748 312 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 CLCN5P51795 746 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 CORO7P57737 925 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 LRRC32Q14392 662 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 GALNT3Q14435 633 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 HIF1AQ16665 826 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 MSS51Q4VC12 460 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 TMEM31Q5JXX7 168 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ARMC12Q5T9G4 340 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 KIAA1211LQ6NV74 962 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 PKN3Q6P5Z2 889 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 Q6ZS52 159 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 TMEM105Q8N8V8 129 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 CLDN23Q96B33 292 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 LRIG1Q96JA1 1093 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 KLHL32Q96NJ5 620 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 FRMD8Q9BZ67 464 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ARNT2Q9HBZ2 717 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 SARDHQ9UL12 918 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 PPM1HQ9ULR3 514 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 A0A1W2PQF6 199 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 HMGB1P1B2RPK0 211 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-201ENST00000293889 PPFIA2O75334 1257 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 TPH1P17752 444 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 MAGEA3P43357 314 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ARL4CP56559 192 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 SESN2P58004 480 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-201ENST00000293889 CDH17Q12864 832 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 HSF5Q4G112 596 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-201ENST00000293889 DNAJC21Q5F1R6 531 aaKnown RBP17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ZSWIM9Q86XI8 627 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 DNAAF3Q8N9W5 541 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 TMIEQ8NEW7 156 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 LPCAT1Q8NF37 534 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ECHDC3Q96DC8 303 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 OSBPL1AQ9BXW6 950 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ADGRE3Q9BY15 652 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 FOXP3Q9BZS1 431 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 ZNF318Q5VUA4 2279 aa17.9■□□□□ 0.46
CCDC78-201ENST00000293889 CKAP5Q14008 2032 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 BANF1O75531 89 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 PRNPP04156 253 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 HLA-DPA1P20036 260 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 COL9A1P20849 921 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 EOGTQ5NDL2 527 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 CCDC25Q86WR0 208 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 PDIK1LQ8N165 341 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 AGGF1Q8N302 714 aaeCLIP17.89■□□□□ 0.45
CCDC78-201ENST00000293889 SYNPOQ8N3V7 929 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 PIH1D2Q8WWB5 315 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 LRFN3Q9BTN0 628 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 CD248Q9HCU0 757 aa17.89■□□□□ 0.45
CCDC78-201ENST00000293889 POLR3BQ9NW08 1133 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-201ENST00000293889 ATXN2Q99700 1313 aaKnown RBP17.89■□□□□ 0.45
CCDC78-201ENST00000293889 FGF1P05230 155 aa17.88■□□□□ 0.45
CCDC78-201ENST00000293889 MGAT1P26572 445 aa17.88■□□□□ 0.45
CCDC78-201ENST00000293889 SLC8A1P32418 973 aa17.88■□□□□ 0.45
CCDC78-201ENST00000293889 GAS6Q14393 721 aa17.88■□□□□ 0.45
CCDC78-201ENST00000293889 STARD3Q14849 445 aa17.88■□□□□ 0.45
CCDC78-201ENST00000293889 QPCTQ16769 361 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms