RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 FBXO22Q8NEZ5 403 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 DDI1Q8WTU0 396 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 MYEOVQ96EZ4 313 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 MRPL9Q9BYD2 267 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 ILKAPQ9H0C8 392 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 MID2Q9UJV3 735 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 RPS6KL1Q9Y6S9 549 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 CAPNS1P04632 268 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 HAPLN1P10915 354 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 OR1D2P34982 312 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF135P52742 658 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 BORAQ6PGQ7 559 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 ANKRD33Q7Z3H0 272 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 PLD6Q8N2A8 252 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 LRRC43Q8N309 656 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 CPSF7Q8N684 471 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 METTL25Q8N6Q8 603 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 FAM210AQ96ND0 272 aa18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 NOL6Q9H6R4 1146 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-201ENST00000284767 TANC1Q9C0D5 1861 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 ARHGAP10A1A4S6 786 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 FAM92AA1XBS5 289 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 PYGLP06737 847 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 ALDH7A1P49419 539 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 THOP1P52888 689 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 FRG1Q14331 258 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 RAP1GAP2Q684P5 730 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MSANTD2Q6P1R3 559 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 KDELC2Q7Z4H8 507 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 SPPL2BQ8TCT7 592 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 CDRT15Q96T59 188 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 CATSPERBQ9H7T0 1116 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MARCH2Q9P0N8 246 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 CIDEBQ9UHD4 219 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 PADI4Q9UM07 663 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MICAL3Q7RTP6 2002 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 SLC12A8A0AV02 714 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MATN2O00339 956 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 HOXA2O43364 376 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 GMPRP36959 345 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MRPS22P82650 360 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MYBPC1Q00872 1141 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 CYLC2Q14093 348 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 HERC3Q15034 1050 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 PGAM4Q8N0Y7 254 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 RTL3Q8N8U3 475 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 MFSD3Q96ES6 412 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 BRD8Q9H0E9 1235 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 LRRC40Q9H9A6 602 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 RAP2CQ9Y3L5 183 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 GREB1Q4ZG55 1949 aa18.44■□□□□ 0.54
PDLIM3-201ENST00000284767 A0A096LPK6 155 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 HDAC3O15379 428 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 FAM58BPP0C7Q3 252 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 APOFQ13790 326 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 ADRM1Q16186 407 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 ANKS3Q6ZW76 656 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 STRA8Q7Z7C7 330 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 LZICQ8WZA0 190 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 CNBD2Q96M20 576 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 CWH43Q9H720 699 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 TIMMDC1Q9NPL8 285 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 TRHDEQ9UKU6 1024 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 FGF10O15520 208 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 APOA4P06727 396 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 PPARGP37231 505 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 FSTL4Q6MZW2 842 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF683Q8IZ20 524 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF669Q96BR6 464 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 TMEM175Q9BSA9 504 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 NMRAL1Q9HBL8 299 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 CASS4Q9NQ75 786 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 TLR8Q9NR97 1041 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 CHRAC1Q9NRG0 131 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 OXSMQ9NWU1 459 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 THEGQ9P2T0 379 aa18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 CNOT11Q9UKZ1 510 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-201ENST00000284767 E2F8A0AVK6 867 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 GOLGA8TH3BQL2 631 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 MTSS1O43312 755 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 HLA-DQB2P05538 268 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 XRCC1P18887 633 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 CCNCP24863 283 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ITGB8P26012 769 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ABCG1P45844 678 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 KCNQ1P51787 676 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 PRKAA2P54646 552 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 SEL1L3Q68CR1 1132 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ITPRIPL1Q6GPH6 555 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 KLC3Q6P597 504 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 RDH11Q8TC12 318 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ATXN7L3BQ96GX2 97 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 GATA5Q9BWX5 397 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 SEZ6LQ9BYH1 1024 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 GRIP2Q9C0E4 1043 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ATXN3LQ9H3M9 355 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 HSFX1Q9UBD0 423 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms