RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MYOFQ9NZM1 2061 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 UBA6A0AVT1 1052 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-201ENST00000279247 GYG2O15488 501 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 LDB2O43679 373 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MXRA7P84157 204 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 LRRC8EQ6NSJ5 796 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 RINLQ6ZS11 566 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 WFDC5Q8TCV5 224 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 NAT14Q8WUY8 206 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 C1QTNF1Q9BXJ1 281 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 MCOLN1Q9GZU1 580 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 LRMDAQ9H2I8 198 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 GPAMQ9HCL2 828 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 SCUBE2Q9NQ36 999 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 SEPT3Q9UH03 358 aa18.05■□□□□ 0.48
CAPN1-201ENST00000279247 FCF1Q9Y324 198 aaKnown RBP18.05■□□□□ 0.48
CAPN1-201ENST00000279247 E9PBE3 544 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 KLHL41O60662 606 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 CLDN11O75508 207 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 GOT2P00505 430 aaKnown RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 SPRED2Q7Z698 418 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 BADQ92934 168 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ARNT2Q9HBZ2 717 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 COMMD8Q9NX08 183 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 SPO11Q9Y5K1 396 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 A0A1B0GVM2 712 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 TCAF2A6NFQ2 919 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 MEI4A8MW99 385 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 H0Y3Z8 333 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 EFEMP2O95967 443 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 CNPP09543 421 aaKnown RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 SBK3P0C264 359 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 CCDC166P0CW27 439 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 GRK2P25098 689 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 CDH18Q13634 790 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ATXN7L2Q5T6C5 722 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 PTCD2Q8WV60 388 aaKnown RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ISL2Q96A47 359 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 PLD4Q96BZ4 506 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 PHF21BQ96EK2 531 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 KLF16Q9BXK1 252 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 K7ERQ8 282 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 NRG2O14511 850 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ATP5HO75947 161 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 MT-CO1P00395 513 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ABL2P42684 1182 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 RASSF2P50749 326 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 PEX6Q13608 980 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 FRG1Q14331 258 aaKnown RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 TPGS2Q68CL5 300 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 CILP2Q8IUL8 1156 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 DDI1Q8WTU0 396 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 ZNF689Q96CS4 500 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 FAM96AQ9H5X1 160 aa18.04■□□□□ 0.48
CAPN1-201ENST00000279247 APOBEC2Q9Y235 224 aaKnown RBP18.04■□□□□ 0.48
CAPN1-201ENST00000279247 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 LOC285095A0A1B0GVY8 99 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 CCDC162PA2VCL2 907 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 B2RBV5 119 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 FGF18O76093 207 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 LAG3P18627 525 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 PMLP29590 882 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 MSLNQ13421 630 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 CNTN4Q8IWV2 1026 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 RAB3IL1Q8TBN0 382 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 SREK1Q8WXA9 508 aaKnown RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 MCUR1Q96AQ8 359 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 TMA16Q96EY4 203 aaKnown RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 WDR55Q9H6Y2 383 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 TSR3Q9UJK0 312 aaKnown RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 LOC100653049A0A140TA62 436 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 TGM5O43548 720 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 KRT34O76011 436 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 PIGNO95427 931 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 MYL4P12829 197 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 PTPN4P29074 926 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 SKIV2L2P42285 1042 aaKnown RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 RAB33AQ14088 237 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 TDRD5Q8NAT2 981 aaKnown RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 OR4K2Q8NGD2 314 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 MAPK15Q8TD08 544 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 AGAP11Q8TF27 550 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 SLC22A17Q8WUG5 538 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 ANKRD49Q8WVL7 239 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 RAB3IPQ96QF0 476 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-201ENST00000279247 NUDCD1Q96RS6 583 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 OSBPL1AQ9BXW6 950 aa18.03■□□□□ 0.48
CAPN1-201ENST00000279247 GPR39O43194 453 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 DLX3O60479 287 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 HNRNPLP14866 589 aaKnown RBP eCLIP18.02■□□□□ 0.48
CAPN1-201ENST00000279247 TSPAN8P19075 237 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 CDKN2DP55273 166 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 SEMA3AQ14563 771 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 ARL13AQ5H913 290 aaPredicted RBP18.02■□□□□ 0.48
CAPN1-201ENST00000279247 GPR158Q5T848 1215 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 HECTD2Q5U5R9 776 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 CXorf57Q6NSI4 855 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms