RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CLIP3Q96DZ5 547 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CIPCQ9C0C6 399 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ALG9Q9H6U8 611 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SNX15Q9NRS6 342 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 F5H5T6 163 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 DAB1O75553 588 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 RALBP11234 206 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 VARSP26640 1264 aaKnown RBP14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TEX44Q53QW1 395 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 THOC7Q6I9Y2 204 aaKnown RBP14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CNSTQ6PJW8 725 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 IGSF8Q969P0 613 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 NPY6RQ99463 290 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 RTP3Q9BQQ7 232 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TRNAU1APQ9NX07 287 aaKnown RBP14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 FBXW11Q9UKB1 542 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 FCF1Q9Y324 198 aaKnown RBP14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 HS3ST4Q9Y661 456 aa14.24□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TMEM247A6NEH6 219 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 A8MU76 341 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 H3BSA7 217 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 KPNA6O60684 536 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TRIM16O95361 564 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 C2P06681 752 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 GSTT2P0CG29 244 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 GSTT2BP0CG30 244 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 COL6A2P12110 1019 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PTPN7P35236 360 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ENPEPQ07075 957 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 KIF19Q2TAC6 998 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SFT2D3Q587I9 215 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PLPP4Q5VZY2 271 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 FSTL4Q6MZW2 842 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 FBXL22Q6P050 247 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 KLHDC10Q6PID8 442 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 DCLRE1AQ6PJP8 1040 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 VPS39Q96JC1 886 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CATSPERBQ9H7T0 1116 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 LRRC40Q9H9A6 602 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 GPAMQ9HCL2 828 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ENTPD7Q9NQZ7 604 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ZNF212Q9UDV6 495 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PCDHB9Q9Y5E1 797 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 C2orf78A6NCI8 922 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PRR5-ARHGAP8B1AHC4 643 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PENKP01210 267 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 HOXD8P13378 290 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SKIV2L2P42285 1042 aaKnown RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 HALP42357 657 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ARHGAP8P85298 464 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PDK3Q15120 406 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ANKDD1AQ495B1 522 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 NADK2Q4G0N4 442 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PPHLN1Q8NEY8 458 aaKnown RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 NXNL1Q96CM4 212 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 DGCR14Q96DF8 476 aaKnown RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ADA2Q9NZK5 511 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 MOSPD1Q9UJG1 213 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CPA3P15088 417 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 MPSTP25325 297 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PTPN9P43378 593 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 KCNJ11Q14654 390 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PDK4Q16654 411 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ANKRD20A4Q4UJ75 823 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 RBM20Q5T481 1227 aaKnown RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CNTD1Q8N815 330 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ENDOVQ8N8Q3 282 aaKnown RBP14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SLC44A1Q8WWI5 657 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 APOPT1Q96IL0 206 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SIGLEC10Q96LC7 697 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 Q9H521 79 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ABCC13Q9NSE7 274 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TEX264Q9Y6I9 313 aa14.23□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CCL16O15467 120 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CDK4P11802 303 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SPRP35270 261 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 GGT5P36269 586 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 OXCT1P55809 520 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ZDHHC17Q8IUH5 632 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 OR6Y1Q8NGX8 325 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 SREK1Q8WXA9 508 aaKnown RBP14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 MTG2Q9H4K7 406 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 PLXNA1Q9UIW2 1896 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 E5RI56 91 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 K7ERQ8 282 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ENPP3O14638 875 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CHADO15335 359 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 NBNO60934 754 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TOMM70O94826 608 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 OCM2P0CE71 109 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 OCMP0CE72 109 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 CD300CQ08708 224 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 GK3PQ14409 553 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 STXBP5Q5T5C0 1151 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 ATG16L1Q676U5 607 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 STRADAQ7RTN6 431 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 TMEM86AQ8N2M4 240 aa14.22□□□□□ -0.13
TNFRSF11A-201ENST00000269485 FBXO22Q8NEZ5 403 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms