RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 LOXL4Q96JB6 756 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 WRAP53Q9BUR4 548 aaKnown RBP12.84□□□□□ -0.35
SS18-202ENST00000269138 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
SS18-202ENST00000269138 GBA3Q9H227 469 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 SMOC1Q9H4F8 434 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 RSPH14Q9UHP6 348 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
SS18-202ENST00000269138 A0A0U1RQS6 177 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 IGLON5A6NGN9 336 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.35
SS18-202ENST00000269138 CES2O00748 559 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 TSPAN6O43657 245 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 MMP20O60882 483 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.35
SS18-202ENST00000269138 ETS1P14921 441 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 PRLRP16471 622 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 PSMB4P28070 264 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 FGL2Q14314 439 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 TMEM52BQ4KMG9 183 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 TMEM259Q4ZIN3 620 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 KDELC1Q6UW63 502 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 TRIM69Q86WT6 500 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 TAB3Q8N5C8 712 aaPredicted RBP12.83□□□□□ -0.35
SS18-202ENST00000269138 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 LPCAT1Q8NF37 534 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 DNASE2BQ8WZ79 361 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 SPOCK2Q92563 424 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 FEM1CQ96JP0 617 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 TRIB3Q96RU7 358 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.35
SS18-202ENST00000269138 MIR1-1HGQ9H1L0 117 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 PCDH9Q9HC56 1237 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 B4GALT6Q9UBX8 382 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 PHTF1Q9UMS5 762 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 SAR1BQ9Y6B6 198 aa12.83□□□□□ -0.35
SS18-202ENST00000269138 SPAG17Q6Q759 2223 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 CFAP69A5D8W1 941 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 PATE3B3GLJ2 98 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 WNT9AO14904 365 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 SLC31A1O15431 190 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 LATO43561 262 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 OPHN1O60890 802 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 GCATO75600 419 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 METTL18O95568 372 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 ITGAVP06756 1048 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 RETP07949 1114 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 ALPIP09923 528 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 ZSCAN5DPP0CG00 497 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 CASQ1P31415 396 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 MMP12P39900 470 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 SUOXP51687 545 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 WNT3AP56704 352 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 POLR2LP62875 67 aaKnown RBP12.83□□□□□ -0.36
SS18-202ENST00000269138 RALGDSQ12967 914 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 GALNT3Q14435 633 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 QPCTQ16769 361 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 WDR45BQ5MNZ6 344 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 ERAP2Q6P179 960 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 NEK5Q6P3R8 708 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 TTC27Q6P3X3 843 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 DRICH1Q6PGQ1 229 aaPredicted RBP12.83□□□□□ -0.36
SS18-202ENST00000269138 CREG2Q8IUH2 290 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 C1orf216Q8TAB5 229 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 RTP4Q96DX8 246 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 C16orf45Q96MC5 204 aaPredicted RBP12.83□□□□□ -0.36
SS18-202ENST00000269138 NCDNQ9UBB6 729 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 FAM153AQ9UHL3 310 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 GMEB2Q9UKD1 530 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
SS18-202ENST00000269138 CA5BQ9Y2D0 317 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 COQ6Q9Y2Z9 468 aa12.83□□□□□ -0.36
SS18-202ENST00000269138 ZFHX2Q9C0A1 2572 aaPredicted RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 A0A1W2PPC4 97 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 PDE2AO00408 941 aaPredicted RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 PAK4O96013 591 aaPredicted RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 IFNB1P01574 187 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 CD27P26842 260 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 HNF1BP35680 557 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 MPLP40238 635 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 LIG3P49916 1009 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 EPHB1P54762 984 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 RPS21P63220 83 aaKnown RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 CDK18Q07002 472 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 SPEM2Q0P670 501 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 ELP6Q0PNE2 266 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 OLIG2Q13516 323 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 SLC14A2Q15849 920 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms