RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RAD21L1Q9H4I0 556 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 HOXC10Q9NYD6 342 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 GMIPQ9P107 970 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 OAZ3Q9UMX2 235 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 FIS1Q9Y3D6 152 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 C16orf96A6NNT2 1141 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 ZBTB24O43167 697 aaPredicted RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 DYNC1LI2O43237 492 aaPredicted RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 SEC14L2O76054 403 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 IPO13O94829 963 aaKnown RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 RBP1P09455 135 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 NOS2P35228 1153 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 SLC26A2P50443 739 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 POU4F1Q01851 419 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 OLIG2Q13516 323 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 AASDHQ4L235 1098 aaPredicted RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 PKN3Q6P5Z2 889 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 SPPL2CQ8IUH8 684 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 ZC3H7AQ8IWR0 971 aaKnown RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 CMTR2Q8IYT2 770 aaKnown RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 C7orf31Q8N865 590 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 SNX31Q8N9S9 440 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 TANKQ92844 425 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 HDAC10Q969S8 669 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 ZBED3Q96IU2 234 aaPredicted RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 C12orf42Q96LP6 360 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 MRPL45Q9BRJ2 306 aaKnown RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 MROQ9BYG7 248 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 HMG20AQ9NP66 347 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 PICK1Q9NRD5 415 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.42
CHMP2B-201ENST00000263780 ANK1P16157 1881 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 J3QRK9 145 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ANGPT2O15123 496 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ACOX3O15254 700 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 DAB1O75553 588 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 PGK1P00558 417 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 EEF1B2P24534 225 aaKnown RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 RXRGP48443 463 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 EFCAB12Q6NXP0 572 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 USP51Q70EK9 711 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 DEFB106AQ8N104 65 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TMCO5AQ8N6Q1 288 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 RNF169Q8NCN4 708 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 CLEC4CQ8WTT0 213 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 OSCP1Q8WVF1 389 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TAMM41Q96BW9 452 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 FBXL8Q96CD0 374 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 FBXL20Q96IG2 436 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ELMO2Q96JJ3 720 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 GJD4Q96KN9 370 aaPredicted RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 HEPHQ9BQS7 1158 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ARMC7Q9H6L4 198 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 IFT80Q9P2H3 777 aaPredicted RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 DAPK2Q9UIK4 370 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TSC22D4Q9Y3Q8 395 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TRAF6Q9Y4K3 522 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 MYO18AQ92614 2054 aaKnown RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 CCDC78A2IDD5 438 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ZBTB42B2RXF5 422 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 C19orf81C9J6K1 198 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 CLDN25C9JDP6 229 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TMX2-CTNND1H3BSU7 103 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 LDLRP01130 860 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ALBP02768 609 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 F7P08709 466 aaPredicted RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 PAMP19021 973 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 HDCP19113 662 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 S100A1P23297 94 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 EEF1DP29692 281 aaKnown RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 HCAR3P49019 387 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 TNK2Q07912 1038 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 NME3Q13232 169 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 OXA1LQ15070 435 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 CYBRD1Q53TN4 286 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 COQ5Q5HYK3 327 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 ADGRG5Q8IZF4 528 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 OR6B3Q8NGW1 331 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 HEXDCQ8WVB3 486 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 GLT1D1Q96MS3 346 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 PGLYRP2Q96PD5 576 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 SLC9A7Q96T83 725 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 BEGAINQ9BUH8 593 aa12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 MLPHQ9BV36 600 aaPredicted RBP12.45□□□□□ -0.42
CHMP2B-201ENST00000263780 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 WNT10BO00744 389 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 NME4O00746 187 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 EI24O14681 340 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 KDM1AO60341 852 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 DNAJB5O75953 348 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 GFAPP14136 432 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms