RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 KIAA1211LQ6NV74 962 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PKN3Q6P5Z2 889 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 GDPD4Q6W3E5 623 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SUGP1Q8IWZ8 645 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 UNC5BQ8IZJ1 945 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 IL17RCQ8NAC3 791 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 TXNDC5Q8NBS9 432 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PYROXD1Q8WU10 500 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PIH1D2Q8WWB5 315 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 FCRL3Q96P31 734 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PPP1R2P1Q96PQ5 205 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 EBNA1BP2Q99848 306 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 CPEB1Q9BZB8 566 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 FOXP3Q9BZS1 431 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ARNT2Q9HBZ2 717 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 LRRC4CQ9HCJ2 640 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 CHRAC1Q9NRG0 131 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 BFARQ9NZS9 450 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 IL36AQ9UHA7 158 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 MUTYHQ9UIF7 546 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 FBXL21Q9UKT6 434 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ANKRD66B4E2M5 251 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 KPNA3O00505 521 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 EIF3HO15372 352 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 HTRA2O43464 458 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC4A1P02730 911 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 GLULP15104 373 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 COL9A1P20849 921 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 DRD1P21728 446 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 NMBRP28336 390 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SERPINA4P29622 427 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 NPY2RP49146 381 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 EPHB1P54762 984 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 RAD51Q06609 339 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ENPP2Q13822 863 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 CCINQ13939 588 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC29A2Q14542 456 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC14A2Q15849 920 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 DNAJC21Q5F1R6 531 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 RALGPS1Q5JS13 557 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 Q6ZS52 159 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 MMAAQ8IVH4 418 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 PLPP6Q8IY26 295 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 KDM1BQ8NB78 822 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 MDGA1Q8NFP4 955 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 OR2W6PQ8NHA6 318 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 RPLP0P6Q8NHW5 317 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 BLOC1S5Q8TDH9 187 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ATXN2LQ8WWM7 1075 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 STAMBPL1Q96FJ0 436 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 FRMD8Q9BZ67 464 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 FOXQ1Q9C009 403 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC6A17Q9H1V8 727 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 VPS37BQ9H9H4 285 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ARHGEF3Q9NR81 526 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 IL1RAPL1Q9NZN1 696 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC2A6Q9UGQ3 507 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ZC3H7BQ9UGR2 993 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 SUN2Q9UH99 717 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 ARL5AQ9Y689 179 aa9.8□□□□□ -0.84
SNRNP40-201ENST00000263694 GOLGA8CPA6NN73 597 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 CCL22O00626 93 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 RIPK2O43353 540 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 TTC4O95801 387 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 CPP00450 1065 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 IL1BP01584 269 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 EPOP01588 193 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 SHBGP04278 402 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 FGF1P05230 155 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 HLA-DPA1P20036 260 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 NTSR1P30989 418 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 MAPK8P45983 427 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 CASP8Q14790 479 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF852Q6ZMS4 543 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 UNC5AQ6ZN44 842 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 C3orf62Q6ZUJ4 267 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 PALM2Q8IXS6 379 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 GJD3Q8N144 294 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 SIX5Q8N196 739 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 FLCNQ8NFG4 579 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 PIP4K2CQ8TBX8 421 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 OR8D1Q8WZ84 308 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 ARRDC3Q96B67 414 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 MFSD3Q96ES6 412 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 TUBGCP5Q96RT8 1024 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 ADGRE3Q9BY15 652 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 TSPYL1Q9H0U9 437 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 C2orf42Q9NWW7 574 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 PPM1HQ9ULR3 514 aa9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
SNRNP40-201ENST00000263694 MAN2B1O00754 1011 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 SOCS5O75159 536 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 SASH3O75995 380 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC34A2O95436 690 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 F7P08709 466 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 CHRNB1P11230 501 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TIMP2P16035 220 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms