RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 FEM1AQ9BSK4 669 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 THUMPD3Q9BV44 507 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 EML4Q9HC35 981 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 KLK14Q9P0G3 267 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ANAPC2Q9UJX6 822 aa16.01■□□□□ 0.15
PRPF40B-201ENST00000261897 ACOT8O14734 319 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 HGFP14210 728 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 TXNL4AP83876 142 aaKnown RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 STXBP2Q15833 593 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 DACT2Q5SW24 774 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 LZTR1Q8N653 840 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 MTRRQ9UBK8 725 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 PHRF1Q9P1Y6 1649 aaKnown RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 C16orf96A6NNT2 1141 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 SLCO1B7G3V0H7 640 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 TPSB2P20231 275 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 HPCAL1P37235 193 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 KCNK10P57789 538 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 TPSAB1Q15661 275 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 INSCQ1MX18 579 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 BORAQ6PGQ7 559 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 AKAP14Q86UN6 197 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 ABHD11Q8NFV4 315 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 HEXDCQ8WVB3 486 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 FICDQ9BVA6 458 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 LHPPQ9H008 270 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16■□□□□ 0.15
PRPF40B-201ENST00000261897 USP22Q9UPT9 525 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 LRP5O75197 1615 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 SDHDO14521 159 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 XPNPEP2O43895 674 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 VTNP04004 478 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 AP3M2P53677 418 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 C1QTNF8P60827 252 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 RPL26P61254 145 aaKnown RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 ECT2LQ008S8 904 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 CACNB2Q08289 660 aaPredicted RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 FRG1Q14331 258 aaKnown RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 LY6KQ17RY6 165 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 TRAF7Q6Q0C0 670 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 PDZD4Q76G19 769 aaPredicted RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 MILR1Q7Z6M3 343 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 PRRG3Q9BZD7 231 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 SMURF2Q9HAU4 748 aa16■□□□□ 0.15
PRPF40B-201ENST00000261897 SEMA4BQ9NPR2 832 aaPredicted RBP16■□□□□ 0.15
PRPF40B-201ENST00000261897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 H0Y626 953 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 RGS5O15539 181 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 GCATO75600 419 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 SIX3O95343 332 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TRIM16O95361 564 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 BMP10O95393 424 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 HSMCR30P0CW71 290 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 CAPGP40121 348 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TUBA4AP68366 448 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 UBE3AQ05086 875 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ADIGQ0VDE8 80 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 SIM2Q14190 667 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ZNF846Q147U1 533 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TRIM60Q495X7 471 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ESRP1Q6NXG1 681 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ZYG11AQ6WRX3 759 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 R3HCC1LQ7Z5L2 792 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 CADM3Q8N126 398 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TXNDC5Q8NBS9 432 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TRPC4APQ8TEL6 797 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TFAP2CQ92754 450 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 MORF4L1Q9UBU8 362 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ERGIC3Q9Y282 383 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 GIT1Q9Y2X7 761 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ORC6Q9Y5N6 252 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TRIM64CA6NLI5 447 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 NOTOA8MTQ0 251 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 APOA4P06727 396 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 GGT5P36269 586 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ZNF132P52740 706 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 SNX16P57768 344 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 PFKFB4Q16877 469 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 CCDC142Q17RM4 750 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 MPZL3Q6UWV2 235 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 C15orf52Q6ZUT6 534 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ERMP1Q7Z2K6 904 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ZFP90Q8TF47 636 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ZNF670Q9BS34 389 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 GNPTGQ9UJJ9 305 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 PSME2Q9UL46 239 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TRAF6Q9Y4K3 522 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 AQP9O43315 295 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 IDH3BO43837 385 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 ZNF37AP17032 561 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 TTKP33981 857 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 IDUAP35475 653 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 SERPINB10P48595 397 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 NOMO2Q5JPE7 1267 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 FAM160B1Q5W0V3 765 aa15.99■□□□□ 0.15
PRPF40B-201ENST00000261897 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms