RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 VPS45Q9NRW7 570 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 ZNF232Q9UNY5 417 aa16.01■□□□□ 0.15
LMNB1-201ENST00000261366 SSC5DA1L4H1 1573 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 PHIPQ8WWQ0 1821 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 FUOMA2VDF0 154 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 ADM5C9JUS6 153 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 NME4O00746 187 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 HBP1O60381 514 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 MAP4P27816 1152 aaKnown RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 APLP1P51693 650 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 MAP3K7CLP57077 242 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 CDH17Q12864 832 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 SQLEQ14534 574 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 CMTR2Q8IYT2 770 aaKnown RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 SIX6OS1Q8N1H7 587 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 BPIFB6Q8NFQ5 453 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 MED10Q9BTT4 135 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 SIK2Q9H0K1 926 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 CD300AQ9UGN4 299 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 HSPA1AP0DMV8 641 aaKnown RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 HSPA1BP0DMV9 641 aaKnown RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 PORP16435 677 aaPredicted RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 IGFBP6P24592 240 aaPredicted RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 CXCR3P49682 368 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 BMXP51813 675 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 PFKPQ01813 784 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 KCTD11Q693B1 232 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 NCCRP1Q6ZVX7 275 aaPredicted RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 PIWIL4Q7Z3Z4 852 aaKnown RBP16■□□□□ 0.15
LMNB1-201ENST00000261366 CAMK1DQ8IU85 385 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 FICDQ9BVA6 458 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 SMARCAD1Q9H4L7 1026 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 DDIT4Q9NX09 232 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 FADS3Q9Y5Q0 445 aa16■□□□□ 0.15
LMNB1-201ENST00000261366 NR1D2Q14995 579 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 PAFAH1B3Q15102 231 aaKnown RBP15.99■□□□□ 0.15
LMNB1-201ENST00000261366 GADL1Q6ZQY3 521 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 DCDC5Q6ZRR9 648 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 TTC16Q8NEE8 873 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 DNAJB14Q8TBM8 379 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 MAELQ96JY0 434 aaKnown RBP15.99■□□□□ 0.15
LMNB1-201ENST00000261366 SLC25A23Q9BV35 468 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 TMEM181Q9P2C4 612 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 A8MT66 165 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 SNAP29O95721 258 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 TGFB3P10600 412 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 NOS2P35228 1153 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 ADRA1BP35368 520 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 STX1BP61266 288 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 MAPRE2Q15555 327 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 CYP51A1Q16850 503 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 GALNT18Q6P9A2 607 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 SNX29P2Q8IUI4 249 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 FUNDC1Q8IVP5 155 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 SLC15A4Q8N697 577 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 VPS50Q96JG6 964 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 NXF3Q9H4D5 531 aaKnown RBP15.99■□□□□ 0.15
LMNB1-201ENST00000261366 ALG9Q9H6U8 611 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 ZFYVE28Q9HCC9 887 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 USP22Q9UPT9 525 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 DGKBQ9Y6T7 804 aa15.99■□□□□ 0.15
LMNB1-201ENST00000261366 LRRC14BA6NHZ5 514 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 UBFD1O14562 309 aaKnown RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 ALDOCP09972 364 aaKnown RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 BDNFP23560 247 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 ATP5F1P24539 256 aaPredicted RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 ELK4P28324 431 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 NPY2RP49146 381 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 KPNA1P52294 538 aaPredicted RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 TNK2Q07912 1038 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 CYP2A13Q16696 494 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 EGFLAMQ63HQ2 1017 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 DHRS4L2Q6PKH6 230 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 PLPPR4Q7Z2D5 763 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 SGCDQ92629 289 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 WNT8BQ93098 351 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 BORCS5Q969J3 196 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 HDAC10Q969S8 669 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 OLFM1Q99784 485 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 GPATCH1Q9BRR8 931 aaKnown RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 MCMBPQ9BTE3 642 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 DNAI2Q9GZS0 605 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 STAP1Q9ULZ2 295 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 TRAF6Q9Y4K3 522 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 LCTP09848 1927 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 A0A0J9YYE9 177 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 TMEM221A6NGB7 291 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 YJEFN3A6XGL0 299 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 SLC4A1P02730 911 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 IL10P22301 178 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 FASP25445 335 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 POLR2IP36954 125 aaKnown RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 TKTL1P51854 596 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 PHEXP78562 749 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 DDIASQ8IXT1 998 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 ANKFN1Q8N957 763 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 TANKQ92844 425 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 RNF34Q969K3 372 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 OTUD5Q96G74 571 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms