RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SARDHQ9UL12 918 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 HEMK1Q9Y5R4 338 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 PSAT1Q9Y617 370 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 TDRD15B5MCY1 1934 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 SYNJ2BP-COX16A0A087WUM0 186 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TRIM43BA6NCK2 446 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM247A6NEH6 219 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TCAF2A6NFQ2 919 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PSMD12O00232 456 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 EOMESO95936 686 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 POLBP06746 335 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 INHBBP09529 407 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 USP17L7P0C7H9 530 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 BMP2P12643 396 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 DCKP27707 260 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MSX2P35548 267 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 BCAP31P51572 246 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 LIMK2P53671 638 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 C21orf59P57076 290 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PITX1P78337 314 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 CACNB2Q08289 660 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 NSUN2Q08J23 767 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MOGQ16653 247 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 OVOS1Q6IE37 1185 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 CCSAPQ6IQ19 270 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 NIPAL1Q6NVV3 410 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 RNF180Q86T96 592 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 CHPT1Q8WUD6 406 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 LRTOMTQ8WZ04 291 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TFAP2CQ92754 450 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 CERS2Q96G23 380 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PLEKHA8Q96JA3 519 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 ADAM2Q99965 735 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PAIP1Q9H074 479 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 UNC93B1Q9H1C4 597 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TRPV6Q9H1D0 765 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 WDR55Q9H6Y2 383 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 NMRAL1Q9HBL8 299 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 COX16Q9P0S2 106 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 EBF1Q9UH73 591 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PCDHB8Q9UN66 801 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 GABRQQ9UN88 632 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 FBP2O00757 339 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 CD1EP15812 388 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TFEBP19484 476 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MYF6P23409 242 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MPSTP25325 297 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 DNAJB1P25685 340 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MGAT1P26572 445 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 HADHAP40939 763 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 SLC5A3P53794 718 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PSME3P61289 254 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 GALNT2Q10471 571 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 STX5Q13190 355 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MAPRE2Q15555 327 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 LIPMQ5VYY2 423 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 ZYG11AQ6WRX3 759 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 LYSMD3Q7Z3D4 306 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 ZNF567Q8N184 647 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 MYO1HQ8N1T3 1032 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PLD6Q8N2A8 252 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TBC1D15Q8TC07 691 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 GRIN3AQ8TCU5 1115 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PBXIP1Q96AQ6 731 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TDRD1Q9BXT4 1180 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 C8orf4Q9NR00 106 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 ZNF358Q9NW07 568 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 DUS2Q9NX74 493 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM9Q9P0T7 183 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 SLC17A6Q9P2U8 582 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 B3GNT3Q9Y2A9 372 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 ANKRD6Q9Y2G4 727 aa10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 TIMM13Q9Y5L4 95 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-201ENST00000261007 A0A096LPK6 155 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 MAGEB16A2A368 324 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 DYTNA2CJ06 578 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 HTR3EA5X5Y0 456 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 STX16-NPEPL1H3BU86 382 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 TMEM189-UBE2V1I3L0A0 370 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 TRIM24O15164 1050 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 AP2A1O95782 977 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 PSMB4P28070 264 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 HOXD10P28358 340 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 HOXD12P35452 270 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 HALP42357 657 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 PRKCZQ05513 592 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 ITGA7Q13683 1181 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 PRPSAP1Q14558 356 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 INTS11Q5TA45 600 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 BSPRYQ5W0U4 402 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 GLB1LQ6UWU2 654 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 ZBTB49Q6ZSB9 765 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 GPRIN1Q7Z2K8 1008 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms