RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DDX6P26196 483 aaKnown RBP eCLIP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 WNT5AP41221 380 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 CSKP41240 450 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 TAS2R60P59551 318 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 BTN1A1Q13410 526 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 SNAPC2Q13487 334 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 PON3Q15166 354 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 EIF2S3LQ2VIR3 472 aaKnown RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 LIPNQ5VXI9 398 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RAET1GQ6H3X3 334 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 TAC4Q86UU9 113 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RIOX2Q8IUF8 465 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 KIAA0319LQ8IZA0 1049 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 POU5F2Q8N7G0 328 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 TSPAN14Q8NG11 270 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RP9Q8TA86 221 aaKnown RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 PNPT1Q8TCS8 783 aaKnown RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 GATAD2BQ8WXI9 593 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ST8SIA4Q92187 359 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 PHKBQ93100 1093 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF347Q96SE7 839 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 EFHD1Q9BUP0 239 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RCOR3Q9P2K3 495 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 TLK1Q9UKI8 766 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 MON2Q7Z3U7 1717 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 H3BMM5 538 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 B4GAT1O43505 415 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 GOT2P00505 430 aaKnown RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 JUPP14923 745 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 CD247P20963 164 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 S100PP25815 95 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ACOT2P49753 483 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 DRG2P55039 364 aaKnown RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 PSPHP78330 225 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 DDR2Q16832 855 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 DNAL1Q4LDG9 190 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 LPCAT4Q643R3 524 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 SGMS1Q86VZ5 419 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 CHERPQ8IWX8 916 aaKnown RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 SLC5A11Q8WWX8 675 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RNF34Q969K3 372 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ARMC5Q96C12 935 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ATG4CQ96DT6 458 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 PIGUQ9H490 435 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF556Q9HAH1 456 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 POLLQ9UGP5 575 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RAB23Q9ULC3 237 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 DHRS7Q9Y394 339 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 COL15A1P39059 1388 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ISPDA4D126 451 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 C2orf71A6NGG8 1288 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TMEM210A6NLX4 147 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 H0YIV9 168 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 GIPC1O14908 333 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 SLC31A2O15432 143 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 CA12O43570 354 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 HNRNPLP14866 589 aaKnown RBP eCLIP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF250P15622 560 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 RAB4AP20338 218 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 CALML3P27482 149 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 UGT2B10P36537 528 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ALDH7A1P49419 539 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 EPHB1P54762 984 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF91Q05481 1191 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF846Q147U1 533 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TRAM2Q15035 370 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NAB2Q15742 525 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 CHRNA2Q15822 529 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TRMT5Q32P41 509 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 PTRHD1Q6GMV3 140 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TYW3Q6IPR3 259 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 BLOC1S2Q6QNY1 142 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ATCAYQ86WG3 371 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 AMIGO1Q86WK6 493 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 THNSL1Q8IYQ7 743 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ULK2Q8IYT8 1036 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NECAB1Q8N987 351 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 MARCH10Q8NA82 808 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ASB16Q96NS5 453 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 GCNAQ96QF7 691 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 GPR62Q9BZJ7 368 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 LRRC4CQ9HCJ2 640 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NKIRAS2Q9NYR9 191 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TSPYL4Q9UJ04 414 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 STOML2Q9UJZ1 356 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 PCDHGA1Q9Y5H4 931 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 A8MXE2 369 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 RGS16O15492 202 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 VEGFDO43915 354 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 PEX10O60683 326 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 DNAJA2O60884 412 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 KRT37O76014 449 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 AGTP01019 485 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FGF4P08620 206 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms